Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1436 |
Symbol | |
ID | 5206607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1760224 |
End bp | 1760865 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599654 |
Product | peroxidase |
Protein accession | YP_001280331 |
Protein GI | 148653238 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00490504 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACATT TACGTCTAGG CGATGATGCA CCAAACTTCA ATGCACCCAC TACTGATGGT GATATTAACT TTTATGATTG GGCAGGTGAT AACTGGGTGG TTTTCTTCTC CCATCCTGCT GACTTTACGC CAGTATGCAC CACTGAATTA GGCCGTGCTG CTGCGTTAAA TGGTGAGTTT CAAAAGCGTG GTGTTAAGCC TATCTGTATC TCTGTAGACA ATGTAGAAGA TCATAAAGCG TGGGCCAGCG ACATCGGTGA GACTCAAGGC ACCGCATTGA ACTTCCCAAT TATTGGCGAT GAAGATAAAA AAGTTGCTGA GCTATACGAC ATGATTCATC CAAATGCAGC AACCACTCAC ACAGTACGTA GTGTGTTTAT TATTGATCCC AAAAAGAAAG TACGTCTTGT ATTAACTTAT CCTGCCAGTG TGGGCCGTAA CTTTGATGAG ATTTTACGTG CCATTGACGC GCTACAGTTA ACCGATGCGT ATAATGTGGC CACGCCTGTA GACTGGAAAG ATGGCGATGA CGTTATCATC CCACCAAGCA TTAAAACCCA AGATATCTCA GAAAAAGACT ATCCAAAAGG CTTTACTGAA ATTAAGCCTT ACTTACGTAC GACGCCGCAG CCAAACAAAT AA
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Protein sequence | MAHLRLGDDA PNFNAPTTDG DINFYDWAGD NWVVFFSHPA DFTPVCTTEL GRAAALNGEF QKRGVKPICI SVDNVEDHKA WASDIGETQG TALNFPIIGD EDKKVAELYD MIHPNAATTH TVRSVFIIDP KKKVRLVLTY PASVGRNFDE ILRAIDALQL TDAYNVATPV DWKDGDDVII PPSIKTQDIS EKDYPKGFTE IKPYLRTTPQ PNK
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