| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1412 |
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| Symbol | |
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| ID | 5206339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1734151 |
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| End bp | 1736010 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599630 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001280307 |
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| Protein GI | 148653214 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.902569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGT TCTCTGAGCA TCCAAAGCGT AAATCATGGC AAGTTGTGGC GGTATTAACT
GCCGCACTCA GCTTGGGTCT ACCTCATGCT TTAGAGGCTA AGCCCATCAC CGTCACCGCC
ATAGGGCACA ATAGCAAGGC ACGTTATAGC AAAGCCCCGG CCATGCCCTA TGCCAATCCA
AGTGCACCTA AGGGAGGGAC GCTATCACAA GCTGCAATAG GCACTTTTAA TAGTGCCAAC
CCTTGGATGA CCACTGGCAT CGCTATGGCC GGTACCGATT ATATGTATGA TACTTTACTC
ACCGGCTCCT TAAATGAGGC GTTTGTCATG TATCCGCAGC TGGCGGACAA AATTACTTAC
GATCCTTATG ACACCAGCTG GGTAATTTAT CACATCAACC CCAAAGCTCG ATTCTGGGAT
GGTACGCCCG TGACCTCAAA AGATGTGCAA GCCACCTTCG ATGCCCTATT AACTAAGGGC
TTAATGCAGG TGCGCAGTTA TTTATCTGGG GTAGATAAAG TGGAAGCGCT CGATACACAT
CGAGTAAAGT TTTATTTTAA GTCTGCCGAT AATAAAGAGA TTTTATTGAC AGTTGGTCAG
TTTCCTATCT TTCAAAAAGC TGCCGTTGAT AAGCATTTTG AGCAGTTAAG CTTAACGCCA
TTAATGGGTA GTGGGCCTTA TAAGCTTGCT AAGGTAGAGC AAGGACGCAG TGTCACTTAT
CAGCGAGACC CCAATTATTG GGGACAGCAA GTGATGGCCA ATAAAGGCCG CTATAACTTT
GAGTTTATCA AGTACGTGTA TTACGGCAGT GATGAAGTGG CGCTTGAGGG CTTTAAAGTG
GGTCAATATC ATTTCCGTCA AGAAAGCTCA GCCAGAAAAT GGGCCACAGC CTATACCTTC
CCCGCCGTCA AAGCAGGCAT GATCAAAAAA GAATCTATCG CCAGTAAAAA TCCAGTGATG
ATGCAGGCTT TAGTGATGAA CCTGCGTCAT AAACTATTTC AAGACATTAG GGTGCGGCAG
GCGCTTACGG ACGCCTTTGA CTTTGAGCTG ATGAATAACA CTTTATTTTA TAATCAGTAT
GAGCGTCTAG ACAGCTACTT TTATGGCTCA GAACTTGCGG CCACTGGCGT ACCGACTGAG
CAAGAAAAAG CAGTGCTGAC GCCTTTATTA GCAAAACTTG AGCCCATTCA GCGGAATGAG
GTACTCAAAG AGTGGCAGCT GCCTAAGTCA GATGGCAAAG GCTATAACCG CCAAGCCTTA
TTAAGTGCGC GCCAAAAGCT GCTACAGGCA GGCTTTTATT ATCAAGATAT GAAACTTTAT
CAGCCGGATG GGCAGCCAGC CAAGCTTGAG ATACTCATTG CTGATGATAA GATTAGCCGA
GTATTGTTGC CTTATGTGAG CAATTTAAAA AAGCTGGGTA TTGATGCCTC AATCCGTCAA
GTGGATGCGC CACAGTATCT TGAGCGTCTG CGCCGTTTTG ATTACGATAT GATTATCGCC
GGCTACCCAC AAAGCTTGTC TCCGGGGGCA GAACAAAGTT ATATGTGGGG CAGTGAGGCA
GCTGATGAAC AGGGCAATCA GAACTATAGT GGTATAAAAA ATGAGGCCAT TGATGATCTT
ATCTCTAAAA TAATCCTAGC CGATAATAGA GAGCAGATTG TGCTCTACAC TAAGGTGCTA
GATAGGGTGC TTCGGGCAGG CTATTATATG GTGCCTATGT ATGGCTCGAC CCAAACCCGT
GTCGTGTACT GGGATAAGTA TCGTCACCAT AAACAGTTGC CTGACAATGC GGTGGGGGTT
GATTATTGGT GGGTTGATAA ATCCGCCGAT GCGACCATTG CTAAGTACTT AAAACGCTGA
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| Protein sequence | MTQFSEHPKR KSWQVVAVLT AALSLGLPHA LEAKPITVTA IGHNSKARYS KAPAMPYANP
SAPKGGTLSQ AAIGTFNSAN PWMTTGIAMA GTDYMYDTLL TGSLNEAFVM YPQLADKITY
DPYDTSWVIY HINPKARFWD GTPVTSKDVQ ATFDALLTKG LMQVRSYLSG VDKVEALDTH
RVKFYFKSAD NKEILLTVGQ FPIFQKAAVD KHFEQLSLTP LMGSGPYKLA KVEQGRSVTY
QRDPNYWGQQ VMANKGRYNF EFIKYVYYGS DEVALEGFKV GQYHFRQESS ARKWATAYTF
PAVKAGMIKK ESIASKNPVM MQALVMNLRH KLFQDIRVRQ ALTDAFDFEL MNNTLFYNQY
ERLDSYFYGS ELAATGVPTE QEKAVLTPLL AKLEPIQRNE VLKEWQLPKS DGKGYNRQAL
LSARQKLLQA GFYYQDMKLY QPDGQPAKLE ILIADDKISR VLLPYVSNLK KLGIDASIRQ
VDAPQYLERL RRFDYDMIIA GYPQSLSPGA EQSYMWGSEA ADEQGNQNYS GIKNEAIDDL
ISKIILADNR EQIVLYTKVL DRVLRAGYYM VPMYGSTQTR VVYWDKYRHH KQLPDNAVGV
DYWWVDKSAD ATIAKYLKR
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