| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1399 |
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| Symbol | |
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| ID | 5206785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1716885 |
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| End bp | 1719317 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599617 |
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| Product | peptidase S16, lon domain-containing protein |
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| Protein accession | YP_001280294 |
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| Protein GI | 148653201 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000669789 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00375305 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTACCC CTAAGTCGCC GAGTGCTACT ACCAAAAAAA TGTCTGATAA AAAAAATAGC
CCATCAAGCT TAAACTGTCA TTCCGGCGCT GCTCGCTTTG ATAAATCAGG CAATCGTACC
AACAAATCTA AGCCAACTGA GCGAACAGTA GCGCAGATTA AGCATCACTG CAAAGTGGCC
GCTAACAAAC TCAAAAAGCA CACTGACCCC TCACAGCTAC CGACATCTAC CCAAGTAGCA
AATAAGCTTG AGTTAGGCTT CGGTCAAGCG CGGGCCGTTC ACGCCCTACA GACTGCCTTT
GATATCTGCG CCAATGGCTA CCATGTGTTT GCGGTGGGTG AAAATGGCCT GGGTAAACGT
ACCTTTATTA CTCAGTATCT CATAAACCAA GGTCATAACT GTCAAAAATA TACAGACCCT
TTAGACTGGA TTTATACTTA TAACTTTATC GAGCCTACTA AGCCTTGTGC CTTGGCGCTA
AAAGCTGGGC ATGCACGCGT CGTCGAGCAA GCGTTACTCA CCATTTGGCA GACACTTAGC
CAAGCGCTTG CCGATCAGTG GCAACAAGCG CAACACAACG CCCAAAGCGC TCATTGTAGT
GTCTTAGCCG CGTTGCTGCA ACAAAGCGCA GATAAGCTAT TAACCTCTTT ATTCACACAA
CACTTTGATG CGCTGCTAGA TCAGTATGCT GATGACACAG TGCTTGCCGA GCCTTTTATG
CGCTATGTGG CTCAGGTTAA GCAAGATATG ATCCAAAATG CGGTGGCCAT CGCTTGCAGT
CAAATTGCCA ACCAAACCCA CAGCCATGAC AGTCGCTTTT ATGTAGGGCC ATTACAGCGC
TTACCGGAGC GCTACAGCCT GACGATTATG GTCAGCCCAA GCTTAGCATC GACGCCATCA
CTGACCAAGC CTTTAGTGCA GCACACACCG GATGGGGCAC CGATTGTATT TGAGCCTTAT
CCCAAGTTAT CGAATTTGCT TGGATATATA GATCAAGCCC GCCATCATGG CAGCGATGTG
AGCAGCCATC GCTTGATTCA GCCAGGCGCG CTGCACAGAG CAAATGGGGG CTATCTGCTT
ATTGAGGCGG CAAATCTGGC CAATCATCCA GAGGCCTGGC AGGCCCTTAA GCTTGCGTTA
CAAACTGGCC GCTTAGATTT GGCCCATTAC CGTCAAAGCG ATCATATTGG TGGGTGGTCG
CTTATCCCCG ACCCCATAGC CTTGAATGTC AAAGTTATTT TGTTGGGCGA TTCAGAGTTA
TATGATCAGT ATGCTGAGCA AGATACTGAG TTTAATGCAC TATTTAAGGT ACGCGCGGAC
TTTCATGAAG AAATCAGACG CACCGCCGAC AATGAGCACG CCATGAGTGG CAAAATGGCT
GATATTGTTA ATAAATATCA GCTCAAGCAT TTTGATAATA AGGCGCAAGC TGTCGTGCTT
GAGTATTTAA GTTTGCAATG TGAGGATCAA AACAAGCTAA GCTTACACAC CGATAGCTTA
ATTCAAGTAT TGCTAGAAGC CAATCGTCAT GCCGAACTTG CTCAATTAGC TTTGGTGGGT
GCCGCTCAGG TCAAGCAGGC GCTACAAGAC ATCAGCTATC GCTCAAGTTA TCTAAAAGAG
CTGTATTTGC AAGAAATTAC CGATGGCCAG CAGCTCATTA ATACCTCAGG CACGGCTGTG
GGACAAATCA ATGCGCTGAC CATTATTGAC TATGCCGACA GCGAATTTGG TATGCCTGCA
CTGCTAACTG CTGTGGTGCA ACACAGTGTC GGCTCATCCG GCGATATTTT AGACATTGAG
CGTGATGTGG AGCTTGGCGG CAGTCTTCAT GCTAAGGGCA TGCTGATTAT GAACAGCTAT
TTGCGCGCGC TATTTAGCCC TTATCATCCA CTAAATTTCA CCGCTTCACT GGCCTTTGAG
CAAAGCTATG CTCATATTGA TGGAGACAGC GCCACTTTGG CTGAAGCCTG TGCACTACTG
TCTGCGCTGG CAGACATCCC CATCTCTCAG GCTTTAGGCA TCACCGGCTC AATGAACCAA
TTAGGCCGAG TACAAGCGGT CGGTGGTATC AATGCTAAGG TTGCCGGCTT CTTCGATGCC
TGCCTGCACC AAGGTTTAAC CGGCAATCAA GGCGTTATTC TACCGCATGC CAATATCTCT
CAGCTGATGC TACGTGATGA TATCATTGCT GCCGTAAACG CCAAAAAATT TCATATCTAT
GGGGTAAAAA GCTTGAGTGA CGCACTGACC ATCTTAGCCG ACATGCCGGT GGATACTTTA
AATAAAAAGG GCCGTTATCA CAAATCAAGC TTATTTGGCA AAATCATTAA AAACTTAAAA
AAATGGGAAG AGCAGCTCAA TCCGCCTGAG GAGATGGAAG ATGAGTCAAG TTCTGGAGAA
CAAAAACCAA CCAAGCCCAA TAAAACCCAG TAA
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| Protein sequence | MSTPKSPSAT TKKMSDKKNS PSSLNCHSGA ARFDKSGNRT NKSKPTERTV AQIKHHCKVA
ANKLKKHTDP SQLPTSTQVA NKLELGFGQA RAVHALQTAF DICANGYHVF AVGENGLGKR
TFITQYLINQ GHNCQKYTDP LDWIYTYNFI EPTKPCALAL KAGHARVVEQ ALLTIWQTLS
QALADQWQQA QHNAQSAHCS VLAALLQQSA DKLLTSLFTQ HFDALLDQYA DDTVLAEPFM
RYVAQVKQDM IQNAVAIACS QIANQTHSHD SRFYVGPLQR LPERYSLTIM VSPSLASTPS
LTKPLVQHTP DGAPIVFEPY PKLSNLLGYI DQARHHGSDV SSHRLIQPGA LHRANGGYLL
IEAANLANHP EAWQALKLAL QTGRLDLAHY RQSDHIGGWS LIPDPIALNV KVILLGDSEL
YDQYAEQDTE FNALFKVRAD FHEEIRRTAD NEHAMSGKMA DIVNKYQLKH FDNKAQAVVL
EYLSLQCEDQ NKLSLHTDSL IQVLLEANRH AELAQLALVG AAQVKQALQD ISYRSSYLKE
LYLQEITDGQ QLINTSGTAV GQINALTIID YADSEFGMPA LLTAVVQHSV GSSGDILDIE
RDVELGGSLH AKGMLIMNSY LRALFSPYHP LNFTASLAFE QSYAHIDGDS ATLAEACALL
SALADIPISQ ALGITGSMNQ LGRVQAVGGI NAKVAGFFDA CLHQGLTGNQ GVILPHANIS
QLMLRDDIIA AVNAKKFHIY GVKSLSDALT ILADMPVDTL NKKGRYHKSS LFGKIIKNLK
KWEEQLNPPE EMEDESSSGE QKPTKPNKTQ
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