| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1398 |
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| Symbol | gidB |
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| ID | 5206695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1716031 |
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| End bp | 1716708 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640599616 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001280293 |
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| Protein GI | 148653200 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00046822 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000739039 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATGAACA CCGCTGAATT TAAAGTGATA TTTAATCAAT ACGATGAGCT TGATACGCTG
TTATTAGAGG CGATTACTCA ATTAAAAATA GACATTAGCG CTGAACAACG CCGCAAATTA
TTGCTATATT TAGACAAGCT ATTATTTTGG AATAAAGCGT ATAATTTGAC CGCAATCAAG
CAGCCAAAAG AGGCATTGAT TAAGCATGTC ATTGACTGCT TAGCCATTTT ACCGCATCTA
AAGCCAGGTA AGCTGTTAGA TATTGGTACC GGTGCCGGCT TGCCTGGCGT TATCGTGGCC
ATTTGTGAGC CTGAGCGACC CATTACTGTA CTTGATAGCA ATCAAAAAAA GATTCGCTTC
ATCCGTCAGT CGATAAGCGA GCTGCAAGTG ACGAATGTCA CACCTGTGGC CAGCCGCATT
GAGAACTTTA ATCCTGATGA AGGGGATAAA TTTGCTGTGG TGACCTCTCG AGCCTTTGCC
AGTTTGACAG ATTTTGTAGA AGCGGCGGCG CCAAGATTAG CACAAGGCGG TTGGCTACAA
GCCATGAAGG GCTTGATACC TGAGCCACAA GAGCTTCAGG TGCTTCAAGA TCAATGGCAA
ATCGATAATA TCGCTTTAAG TGTGCCTTAT TTGCATGAGA CACGGCATTT AACTGAGTTA
CATAAGATTG TGATCTAA
|
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| Protein sequence | MMNTAEFKVI FNQYDELDTL LLEAITQLKI DISAEQRRKL LLYLDKLLFW NKAYNLTAIK
QPKEALIKHV IDCLAILPHL KPGKLLDIGT GAGLPGVIVA ICEPERPITV LDSNQKKIRF
IRQSISELQV TNVTPVASRI ENFNPDEGDK FAVVTSRAFA SLTDFVEAAA PRLAQGGWLQ
AMKGLIPEPQ ELQVLQDQWQ IDNIALSVPY LHETRHLTEL HKIVI
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