Gene PsycPRwf_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1389 
SymbolfabG 
ID5206634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1703177 
End bp1704577 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content47% 
IMG OID640599607 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001280284 
Protein GI148653191 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.010346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000115486 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGATC GCTATGGAGA GTTTGTACAG TCACCGCTAG GAAAAAAAGT GGCTAAAAAT 
TTAGGACTGC CTTTACCGAC TAAACTAGAT CGTTTTGAGC CGGGTGAAAA AGTCGTCCGT
GGTAGCGTAT TATTTGGCTC AGCCTCAGGA GACGATAGCC GTCTAAGTGA TGCCATCGCC
CAAGTGTTAA GTTCACTACA TGCTGAGGTA TACGTTGCTG GCGATGATGC ACACAAAGAC
GTTTTGTCAG GTGCAGGCGT AGAAGCCAAA GACAGCGAAG GGCACACTGA AAAATATAAA
GTATTGGTTT TTGATGCCAG TAACATTGCT CATGCCCCTG ACTTAAAAGA GATGTATGAC
TTTTTCCATC CTGTGGCACG TCAAGTTGAA AAATCAGGCC GTGTGATCAT TATTGGTCGT
CCACCAGAAG AGTGCGACCG TATTGGCAAA ACATTATCAC AGCGCGCCCT AGAAGGCTTT
GTAAAGTCTG TCGGTAAAGA GTTCAAAAAT GGTATTACCG CGCAGCTTAT TTATGTGAGT
GAAGGTGAAG AGGCGAATTT AGACTCAACG CTACGCTTCT TTATGTCGGC ACGCTCTGCT
TATGTTTCAG GTCAAGTGGT TCGTGTGGGT GCAGGCAGTG TGGTCGATGT AGATTGGTCT
AAGCCACTGG CTGGCAAGAC GGTACTTGTG ACCGGCGCAA GCCGTGGTAT TGGTGAGTCT
ATGTCACGCG TATTGGCGCG TGATGGCGCA CATGTTATTT GCTTAGATGT GCCGCAGCAG
CAAGCCGATT TACAAAAAGT GGCTGGCGAA ATTGGTGGCT CAACCCTCGC TCTAGATATC
ACAGCTGATG ATGCTGGCGA GAAGATTGCA GAAGCTGCAG CCAAACGTAA TGGTCTAGAT
GCCATTATTC ATAACGCAGG GATAACCCGT GATAAGACAC TGGCTAAGAT GGATGACAAG
CAGTGGGATA TGGTTATCAA CATCAATTTG CAAAGTATCG CCATGATTAA CGATTACCTA
TTTGATAATG ATGTATTGAA TGAAAATGCA CGGATCGTCT GTGTATCATC AATCTCAGGT
ATCGCCGGTA ACCTAGGTCA AACTAACTAT GCCACCTCGA AAGCGGGCGT AATCGGCTTG
GTTCAAGCCA CCGCTAAGAA GCTAAAAGCT GAAGGTAGAG GCATCACTAT TAATGCAGTC
GCACCTGGCT TTATCGAAAC TCAAATGACA GCCGCCATTC CCTTGACTAT CCGTGAAGCG
GGCCGTCGTA TGAACTCTAT GAGTCAAGGT GGTCTACCCA TTGATGTGGC AGAAACCACT
GCTTGGTTGG CAGCACCTGC TTCAGGCGGC GTAAATGGCA ACATCGTACG TGTCTGTGGT
CAAAGTCTAT TGGGCGCTTA A
 
Protein sequence
MSDRYGEFVQ SPLGKKVAKN LGLPLPTKLD RFEPGEKVVR GSVLFGSASG DDSRLSDAIA 
QVLSSLHAEV YVAGDDAHKD VLSGAGVEAK DSEGHTEKYK VLVFDASNIA HAPDLKEMYD
FFHPVARQVE KSGRVIIIGR PPEECDRIGK TLSQRALEGF VKSVGKEFKN GITAQLIYVS
EGEEANLDST LRFFMSARSA YVSGQVVRVG AGSVVDVDWS KPLAGKTVLV TGASRGIGES
MSRVLARDGA HVICLDVPQQ QADLQKVAGE IGGSTLALDI TADDAGEKIA EAAAKRNGLD
AIIHNAGITR DKTLAKMDDK QWDMVININL QSIAMINDYL FDNDVLNENA RIVCVSSISG
IAGNLGQTNY ATSKAGVIGL VQATAKKLKA EGRGITINAV APGFIETQMT AAIPLTIREA
GRRMNSMSQG GLPIDVAETT AWLAAPASGG VNGNIVRVCG QSLLGA