Gene PsycPRwf_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1382 
Symbol 
ID5204725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1695390 
End bp1697294 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content52% 
IMG OID640599600 
Productdihydroxy-acid dehydratase 
Protein accessionYP_001280277 
Protein GI148653184 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase 
TIGRFAM ID[TIGR00110] dihydroxy-acid dehydratase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.469767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000362711 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATACC GCTCTAAGAC CTCAACTTCA GGCCGCAATA TGGCTGGTGC CCGTGCATTA 
TGGCGTGCCA CAGGTATGAC TGATGGTGAC TTTGATAAGC CAATTATCGC CATTGCCAAC
TCCTTCACCC AGTTTGTTCC AGGTCACGTC CATCTAAAAG ACATGGGCCA ACTGGTTGCC
CGTGAGATTG AGCGTGTGGG CGGGGTTGCC AAAGAATTTA ACACCATCGC GGTCGATGAT
GGCATTGCCA TGGGTCACAG CGGTATGCTG TACTCCTTGC CAAGCCGTGA CTTAATCGCA
GATTCTGTAG AGTATATGGT CAATGCCCAC TGCGCAGATG CGTTAGTATG TATCTCAAAC
TGCGACAAAA TCACCCCAGG TATGTTAATG GCAGCCATGC GCCTAAACAT CCCAGTTATC
TTTGTCTCAG GTGGCCCTAT GGAGGCCGGC AAGGTATTGG CTGAAGATTT AGCGCCCAGT
CATAATCTTG ATGCCCCCGT CAATGAAGAT GGCAAAAAAA TCCGTAAGCT AGATCTTGTG
GATGCCATGA TTGACGCCGC TGATGACAAC GTAAGCGATG CTGACGTGTT AGAGATTGAG
CGCTCCGCTT GCCCAACGTG CGGCTCATGC TCAGGCATGT TCACCGCCAA CTCAATGAAC
TGCTTAACCG AAGCCTTAGG TCTATCTTTG CCCGGTAACG GTTCATTGCT AGCCACTCAT
GCCAAGCGTG AAGCCCTGTT CTTAGAAGCC GGTCGCCGTA TTGTTGATTT AGCAAAACGC
CGCTATGAGC AGGACGATGA GTCAACCCTG CCCCGCTCTA TTGCCACCAA AGAAGCCTTT
GAAAACGCCA TGAGCCTTGA TATCGCCATG GGCGGCTCAA CCAATACCAT CTTGCATTTA
TTGGCCGCTG CGCATGAAGC GGAAGTTGAC TTTAAAATGG CCGATATCGA CCAGTTAAGT
CGCCGCGTGC CTTGCTTATC AAAAGTGGCG CCTGCTACCC AAAAATACCA TATGGAAGAT
GTGCACCGTG CCGGCGGGGT ATTGGCAATT TTGGCCGAGC TAAATCGTGC CGGTCTATTG
CACACAAACT TGCCAACCGT TCACGCCAAG ACCTTGCAAG AAGCGCTTGA GATGTGGGAT
GTGATGAATA CTGATCATCC CAATCATGAA GCGGCACGTG ATTTGTATAT CGCAGCACCA
GGCGGCGTAC GTACCACCCA AGCTTTCTCA CAAAATAAAG CCTGGTCCAA TCTGGATCTA
AACCGTGAGT CTGGCTGTAT CCGCTCTGCC GAGCATGCTT ATTCTAAAGA CGGCGGTCTG
GCCGTATTGT TCGGTAACAT TGCTGAGCGT GGCTGCGTGG TAAAAACTGC TGGCGTTGAT
GACAGCATCC TAACCTTCAC TGGCCGTGCC CGTGTGTTTG AGTCACAAGA TGATGCCGTA
GAGGCCATCT TGGCGGACAA AGTCGTGGCC GGTGATATTG TCATTATCCG TTATGAAGGC
CCGAAAGGTG GCCCGGGCAT GCAAGAGATG CTCTACCCGA CTTCTTACTT AAAATCAAAA
GGCTTGGGTA AAGAGTGTGC GCTATTAACC GATGGCCGCT TTTCTGGGGG CACCTCGGGT
CTATCAATCG GCCATGCCAG CCCGGAAGCT GCCGAAGGTG GCGCTATTGG TCTAGTAAAT
GAGGGTGATA CCATCCACAT CGACATTCCA AATCGCAGCA TTAACCTGGA GGTCTCTGAC
AGTGAGCTTG CCCGCCGCCG TGAAGAGATG GAAGCACGTG GTAGCAAAGC TTGGAAACCT
GAAAGTCGCG AGCGCCATGT CAGTCAAGCC CTACGTGCCT ACGCCGCCAT GACCACCAGC
GCGGATACCG GTGCGGTACG TGACGTGAGT CAAGTTGAAC GTTAA
 
Protein sequence
MQYRSKTSTS GRNMAGARAL WRATGMTDGD FDKPIIAIAN SFTQFVPGHV HLKDMGQLVA 
REIERVGGVA KEFNTIAVDD GIAMGHSGML YSLPSRDLIA DSVEYMVNAH CADALVCISN
CDKITPGMLM AAMRLNIPVI FVSGGPMEAG KVLAEDLAPS HNLDAPVNED GKKIRKLDLV
DAMIDAADDN VSDADVLEIE RSACPTCGSC SGMFTANSMN CLTEALGLSL PGNGSLLATH
AKREALFLEA GRRIVDLAKR RYEQDDESTL PRSIATKEAF ENAMSLDIAM GGSTNTILHL
LAAAHEAEVD FKMADIDQLS RRVPCLSKVA PATQKYHMED VHRAGGVLAI LAELNRAGLL
HTNLPTVHAK TLQEALEMWD VMNTDHPNHE AARDLYIAAP GGVRTTQAFS QNKAWSNLDL
NRESGCIRSA EHAYSKDGGL AVLFGNIAER GCVVKTAGVD DSILTFTGRA RVFESQDDAV
EAILADKVVA GDIVIIRYEG PKGGPGMQEM LYPTSYLKSK GLGKECALLT DGRFSGGTSG
LSIGHASPEA AEGGAIGLVN EGDTIHIDIP NRSINLEVSD SELARRREEM EARGSKAWKP
ESRERHVSQA LRAYAAMTTS ADTGAVRDVS QVER