Gene PsycPRwf_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1362 
Symbol 
ID5205104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1663134 
End bp1663892 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content35% 
IMG OID640599580 
Productintegrase catalytic subunit 
Protein accessionYP_001280257 
Protein GI148653164 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0397787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGT TCAAATTGGG TGATAAATAC AGTACTGTTA AGCAACAGAT TGCAGAGATT 
TATCATAAAC ATAAAGGCAG ATATGGGTAT CGCAGGATAA CATGGGTCTT GAAAAATCAA
GGTGTTCTAA TCAACCATAA ATGCGTGTAT CGTCTCATGC AAGAAATAGG ACTAAAATCA
GTTGTTCGAC CTGTAAAATA TAAATCCTAT AAAGGAACAG TTGGTAGAAT TGCAGATAAT
GTGTTGAATC GAGAATTTGA AGCTAACCAG CCAAATAAAA AGTGGGTTAC AGATGTTACT
GAATTTAAGG TCAAAGATGA AAAGCTTTAT TTATCGCCTA TGATGGATTT ATTCAATGGC
GAAATTATTG CCTATCAACT CAAACGCAGA CCAACGTTTA ATTTAGTTGA ATCTATGCTA
ATAGAAGCCA TGGATACGCT TAAGCCTGAT GAAAAACCTG TCGTACATTC TGACCAAGGT
TGGCAATATC AAATGAAACG TTATCAAAAG CACCTAACGA ATCAAGGTTT AACTCCAAGT
ATGTCTAGAC GGGGCAATTG TCTAGATAAT GCTTGTATAG AAAGTTTTTT CGGCGTTCTT
AAATCGGAAT GTTTTTATCG ACATGAATTT GTCTCAATTG AGGAGTTGGA AGAAACTGTG
AGAGAGTACA TCTACTATTA CAATAATAAC CGAATTAAAG TGAAATTAAA TGGTTTGTCG
CCTGTGCAAT TTAGGAGGAA ATATTTAGAA GCTGCCTAA
 
Protein sequence
MKRFKLGDKY STVKQQIAEI YHKHKGRYGY RRITWVLKNQ GVLINHKCVY RLMQEIGLKS 
VVRPVKYKSY KGTVGRIADN VLNREFEANQ PNKKWVTDVT EFKVKDEKLY LSPMMDLFNG
EIIAYQLKRR PTFNLVESML IEAMDTLKPD EKPVVHSDQG WQYQMKRYQK HLTNQGLTPS
MSRRGNCLDN ACIESFFGVL KSECFYRHEF VSIEELEETV REYIYYYNNN RIKVKLNGLS
PVQFRRKYLE AA