| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1361 |
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| Symbol | |
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| ID | 5205103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1656069 |
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| End bp | 1663058 |
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| Gene Length | 6990 bp |
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| Protein Length | 2329 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640599579 |
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| Product | hypothetical protein |
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| Protein accession | YP_001280256 |
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| Protein GI | 148653163 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0713283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATGGT CGGATGCTTA CATTGAAGAC ATCTACTTCA CAGTTGAGGA TGGGTCACAG
CCGTCATTCA CCTTAAGTAA TGGCACGCCG CTATATTATC GCTATAAAGA GGTTAATGGT
GAGCCAGACC TGCATACTAT TTATGCAACG AAAACCCAAG CAGGCCCAAT CAAAGAGGGT
TTAGAAAGTG ATGGGGAGAC TGTTAATGAG TCTGAGAATA ATGTTGCTTT TAAGGTCACC
ATTAATCCTG ACAACAACAG TTATGTCGCC ATCTTGTATG ACACGATTCG ACATCCTGAT
GTGGATGCGA ATGATGATAA TCTGATTGAT AATGCCATAT TTAATCTGCA GTATGCACTT
GAAGACAGTG ACGGATCTAT TGTTGAGGAC TCGTTTAATC TTGACGTTGA AAATAGACTT
GTCGCGGAAA ACCTAGTGTT CATTATCAAT GAAGCCGATT ATGGTGACTT GACCGATGAT
GGCTCGGATG TATTGGTTAT TAATGTCGCA GAGACCTTTG ACGGTGGTGT CATTCAGCTA
TTAAGCAAAG ACTTTGTGAG CAAGTCGACC ATTACGTCAG GACAAACCCT TTATATTGAT
GTTCATGGTA AAGAAGTTGC TGCAAATGAC CCAACGGCAG TTGGTTCTGT CAAAAACATC
GGTAACGGGG TTATTGAGTT TGATCCAGCA GAAAACTATT CAAGCTTTGT TGGCGATGAT
GTAAGTTTTA ATGTTCGTGC GCAAGATGGC GGTATGGCAC TCACCCGTAG TGTCACAGTC
AAGGTTAATC CAATCGAAGA TGCACCAATT ATCGTCATTG ATGATGCAGA GGTGAGTATC
GTTGATGATA ATTATACGAT TTATGTCGAA GAAGATACTT CAGCACAGCT TGGGTTTAAA
GCGCCAATTA TTGGTGATTT GGGGATTGAA AACGGCACTC TAGATATACT AAATCCTGAT
TATTTGGTAG CAAATACTGG TAATGATGAT GATTTAGAAA ATGGTGGTTC AGTTGACCGC
TCCGAGCGTT TGGGTGCAAT CACATTAAGT GGTATACCTG ACCGTGCTGA GCTGTTTTAT
ATGGATAGTG ATAATACCAA ACAGGTGGTT TATGCCGTTA CGGATACAGC GGGCAGCGTC
ACTATAACGC TCACCGATGG TATTCATATC CTAGACTCAG AAATGAGCTT TGATAAAGAA
ATGACCACCG AGCAGTTTGA ATCATTGCAA ATAGCTGCGC CTGCAAACAG TGGCACTAAC
TTTGATGTGT TCATGAGTGT GACTGAGTAT GAAGTGGATG AAAATAATAC GCCATTGAGC
ACAGATAAAG GTTTTGTCAC CACGACTGCC ACGATTATCG TTGATGTGCA AGCAGTGACC
GATGCACCGG TGATTGACTT GGTTGGCAAT AATGAGGTAA CGGTAGGCGC AAACCTAATC
ACAGCCAGTA TTGATGAAGA CACAACATTA AGTCTACAAA ATGTGATTAA TGAACGCTTT
GAAGATAAAG ATGGCTCAGA GCGTTATCAA TATCAAATTA CAGGATTGCC TGAAGCAACC
ACAGTTGTTA TTGCAGGTCA AACGCTCACA GCAGGCTCTA ATGGCACGGT GACGTCATCA
TTTAAGACAG TGAATATGAA TACTGATCCT GTCATTGATA TGACGCCGCC ACAAGATTAC
GCCGGTGTAA TCGAAGCAAC CCTGACGCTA ATTACCAAAG ATCGAGAGCC TAATGGAGAA
AAAGACATTA CAGATAAAGA CGATAGCAGT GCAAATATTG CTGAGCAGTC AACTTCTGTA
GAACTAGAGC TGACCGTTAA TCCTAAGCAT GATATTGAGG TTGCCACACC TGGCGAAGGT
AAAGAAGATA CTCAGATTGC CTTATTTAAA GACGAAAATG GTGATCCAAT CATTACAGTA
ACCGATGCAG ATGGCAGTGA AATGATCACA AGTGTCGGTA TCTCTAAACA GCAAGTAGAT
GACTTTATAT CAGCCGGTGG CAAATTCATT ATTGACATAA ACGGTACCGA ACAACCAGTC
GACACATTCA TTGAACTTCC AACTCAGCCA GGCTTTTATC AGTTTTATGG AGACAGTGTT
TCAGGCATTG TGGATTTACT TGATATCACA ATTGTTCCCC CTGCGCACAG CAGTAAAGAC
ATCGATTTCA CCTATTATGT TGAAACAACG GATACCTCAA TTGGTGCAGG TGCATTAGCG
CAGACAGATG GTGATACTTT TGACAGAACC ATTAAAGTGA CGCCAGTGGC GGAAAGCGTT
GATACTGATA GCGACGGTGC AAATGGTAAT GATGTGACCA TGAATCCTGA TTACACTTAC
ACAAGCACCA TTTACGAGGA TGGAGATCAT GATGATGACT CTAGCACAGC GCCTGATTGG
TTTAATCTGA ATGATGGCAT TGATCTAAAA GCAGCGTGGT CAAATGAGGA TCAATCATCG
CTGACAAATG GAACGGGGAG TGTTTATACG GATTCTGAAG AAACCTTTGC CCGCCTAACG
GTGCAGATTG AAGACAGCCA GAATCCTGGC AGCTTTGCTA AGGCAGCGGG CGCACAGTTT
CGGTATGAGC TAAACGGCAA TACTGTTGAG GTGACAGCTG GTAAAGACGG TATCGATGTT
CCAGCAGTGG CGCTTGATAC GTTAAAATTT ATTGCGCCAC CAAACTATGC CGGTGAGGTG
CAGATTGTGG TCAATGCTGT GACGATTGAT TATGATGAAG ATGACGACAC AGCTACGCAA
GAAACAGTGT CAGGTGAGTC TATTCTGAGT ATGACGGTGA CTGCTGTTGC AGATGATGTC
TTGTTAAGTG TTCAGCCAGC GCGTGGCTTT GAAGACGCGG GCCGTAGTAA GGGCAATCCG
CCTGAGGATG TCGATCCAAC TTATATTCCA AGCGGTTTTA TAGACATGCC TGAAAACGGC
ATTCCTCTTA AAATAAAAGC GCAATCAGAA GATAAAGATG ACTCTGAAAC CTTTAACATC
ACCATCGAAA ACTTACCAGA TGGCAGCGCT TTGTATGTTT ATGACGCAGT GAGTCATACT
TACATACTGG TGGCTCAGAA TTATACAGGC GCAATTGATT CGTTTACGCT CAATGATGCA
GATTCAACAG ATGGCGCGTG GTCCATCACA TTGAATGACT ATGACAACAG TCAGGTTCCG
ATGTTTATTC CACCAAGCAA TAGCAGTAAT AATTATGAAT TGCTGGTGAG TGGTGAGTCT
GTCGATGGGA CAGATGTGGC CTCTATTAAT AGCGCGCCTT TAATTTTGCC AATAAAAATT
GCTACAGTGC CAGACAAAAT CCTAAATGAT GAGCTGAATA CAGTAGAAAC AGCTGGCTTG
GATGGCTTTG AAGATGCAGC AGCGGACAGC TATACCCTCA TTGAAGAGGA AAGTAATATC
GATGCCAATA ACAATCAAAT AGAGTTTAAA TCTATCTTCC AGACACCAGA GGATATTGGC
TCTTATGACA CAGATGGCTC GGAAGTGGTC ACTTATGTGA TTACCGGACT TGATGACAGA
TTCTCAATGA TAGGTGCAGA TGTCACCTAC TTGGGCGGTG CTGGTATCGC TCGTCAATGG
GTGGTTACTA AAGAGGCTGT TGAAACTGGC GATGCTCGTA TTCAATTAAA TGAAGACTTT
GCAGGAGAGA TTAACTTTAC CGTTCAAGGC ATTAGTACTG AGCAAGAAGG GGGCAGTGAG
ACCACTCAAA ATCTTCGCTC TGTGAGCATT TTTGTGACAT CCGATGCGGC AGATAATAAT
GTTGGTAACC CTGTTGTCAC ACAAACTGAA AACGAATCGG TAGTGTTAGA CTTGCAAGGC
GTGTTTAACA AAACGGATTC ACCGGTTGAT GCGCGTAATG GCGTTGAAGC ATTGAAGAGT
GTGGATATTA ACGTCACTGA TTTAGAGGCG CTGGGTGTGC AGCTCATAGT TGATGGTACA
CCCATAACAG ACACGCTTGC AAATTCTGAC GGTTTTTATA CCATTGAACG CGATGCGGAT
GGGAATCTGC CTGTCGTTTC AATCCAAGCG CTACCAGACA ACTCTGAAGC CGGTTATGTA
AACCACAAAT CAGGAGATGA CGTTTATAGT TTTGCTATCA AATACAATGT GACTGATACA
GTATATAACA CGCAAAGCAT CACTGATCCA AATGCAGCGG TAGTGTATCA AGAAGAAACG
GTTAAAGATG CGATTTATAA GGTTAATGTT ACGGCCAAAA CCGATGCACC GGAAATCCCT
GACTCAGATA GAGTGGCCCT TGAAACAGCG GAATCTATTA ATTTAGATAC AACCAATGGC
AACCCTATCA GTGACAGCTT TACTAAAACG GTGGCTTTGA GCTCACCCGA TCAAGATGGT
TCAGAGAAAT TCACTCGCAT AGAAGTGGGT AATGTGCCAA ATGGCCTGCA AGTAGAGGTT
GATGCAGGTA GTGGGTTTGT TGCAGCCATT AAAGCGGGCA ATACTTGGTA TGTTGATTTT
GCTGATGAGC CAATCACTGA TATCGCGCCG AGTGTTGATG TTAGGTTCAG CATCAAGCAA
GGTTACGATG TGGATGCTGT AACCGATCAG ACCATCACTG TGACCGCCTT TAACCAAGAT
GCACCAGATA CTGAAAAGTC GGCTAACGCG TCATTTAAGC TAAGTATCAC ACCAGCAGAT
GGTGATACAG TAGGCAATGA AAACCCAGAT TTGGTGGCAA ACATTACTGT TGATCCAATC
GTGCTAACAG AGGACACAGC AGATCAAAAT CTCGGCAATT TCGTTACCGG TACGATGAAT
GAAGCAGCTT ACGCTAATAA TGGGACACGG CTACCATTGT CATTTACCAT TGCGAATTTA
CCTGATGATG TGGTGCTTGA ACTAACGGAC ACCAATCTAG GCAGTCTGAG CAAGCAGGGG
AACTTGTGGT TAATCAGTGG TGAGGCTGCC AGTGATAGTG ATATTACCAA TTTACTAAGC
AGCATTACCA TCAGCCCAAC CAACGATTAC AGCACCAATA ATGCTGGCGA GACGGTCACT
TTAGATATTT CATTAACCGC TACAGATAAC AATGGCGACT CTGAAACTGA AACGGCAGAT
CCAACAACGA GCACCTTGGT TGTGAGACCT GTGACAGACT TTATGGACTT CAATACAGAG
GGCGCTGTAA CGACTGAACA AATCGCCCTA GATGAAGACG AAACGCTGCC GCTAACGCTT
GATTTGAGCA ACACTGCTGA TGCTGGCAAT GTGGTGGTTA CAGAGGGACG CATTTATCTT
AAAGTGTCGG ATGGCAACAC AATACTCGGT GAGCTAACCG ATACCTCTGG CACGGTACTA
ACCGAGGTAA CGGATCCTGC AGGACTAGCT GCCGGTACCT ATTATGTGCT TGAGGTGGAT
ACCAATAACC CGACAGGAGC AGACTTCAAT TTCATGCCAG CGGCTAACGA AGACGGAACA
CTCAACATTG AGGCCTATGT TGTACATAAA GAGTCAACAG ATATTGATGG TTATGACACA
GGCACTAAAG TCTCTCGCAA AGACTTTGAA ATTACAGTGA GTAAGGCGCC TGACATACTC
ACGCTTGCTG TCGACGAAAC AGCTTCGCAA ATAGCGGTGA ATGAAGATAG TGCGGTGAGT
ATTCAATACA ATATTGTACA AGCTGATGAA GATGATGTCG CGAAAACCTT CATTCTTGAA
AACGTTAATG ATGACTTTAA TGTGGTTTAT TTCTCTAATG GTACTGAAAA AGCAGCAACC
AAAACCGGCA TCGGGACATG GAGCGTGCCG AGTACGTCAA ATGACCCAAC CCCTGAGATT
CAGATTCGCA CACCAGAGCA CTTTAGTGGT GTGAGCTCAG TTGATATATC GGTATTGAGT
GATTCAGGCC TGCAAGGTGC TGCAACCACC GTTGATTTAA CCTTTACCGC AGTGGCAGAT
CCTGTTGAGA TGACCGCGCA AAATTCAGCG GGTCAGGCCT ATGAGTGGGT AGAGCTCAAC
ACTAACATTA AAATGACCGA CGATGACGGA AGTGAAACGC TGACATTGAC CATTGCACCA
GCAGCTGGCA AGCCATTTCA GGACACCATG TTGTTTAGAA TTGGTGATGA TGGTACGGTG
ATGGGATTGA ATAATGCGTC AGCAGATGCG GATGGTGTCG CCATAAGTTT TGATGGCACC
AACTACAGGC TAACGGGTAT TCCAGCCGAT AAAGTCAATG ACATTCAGAT TCTGTCTCAT
GATTATAGCG GCGAAGTGAC GTATACCACT CAATCGGTAG AGACCTCAAA CGATGACGCA
TCTGCCGAAG TTGTTGGAAC AGCGAACTTG AACCTGAGTA ATTCTGTTGA AATCAATACG
GGTGCTCAGA ACGACACCAT TACCGGTGGC AATGGTAATG ATGTGATCAA CGCTGGTGCT
GGTGATGATG TGATTTATGG CAAAGCTGGC AACGACACCA TTAATGGCGG TGAGGATGAT
GACGATCTTA AAGGTGCAGA AGGCAATGAC ATCTTAAACG GTGGCGCAGG TGATGACACC
TTGCGTGGTG GCAGTGGCGA TGATTACCTC GATGGCGGTG CTGGTGAAGA CGGCCTATAT
GGTGACACGG ACAATGATAC GCTTGTGTTT GATAGCGCTA ACCGCTTTAT GAATGGCGGC
GATGGTGTTG ATGCTTTGTT ATTGCCTGCG GCCAGTAGCA CATTTGATTT CAATAGCTTG
ATAGGCACAG TCACTAACAG TTCGCTAAAC AAAGTCAGTA ATATCGAAGT GCTTGACTTG
TCTGGTGCTG ATTTCACCAT CACTGAATTG ACTGCCAACG CGGTGATTCA GATAACTGAT
GAAAACAATC ATTTGGAGAT TGATGGCGAT AATAGCGATA GCGTCCAATT GACTGGCAAT
TGGGAACAGG GGGCGACAAG TGGTGGTTAT ACCAGTTACA GCCTCAATGA CACAACCATA
AGTATTGATA CAGGTATCAC AATCCTGTAG
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| Protein sequence | MGWSDAYIED IYFTVEDGSQ PSFTLSNGTP LYYRYKEVNG EPDLHTIYAT KTQAGPIKEG
LESDGETVNE SENNVAFKVT INPDNNSYVA ILYDTIRHPD VDANDDNLID NAIFNLQYAL
EDSDGSIVED SFNLDVENRL VAENLVFIIN EADYGDLTDD GSDVLVINVA ETFDGGVIQL
LSKDFVSKST ITSGQTLYID VHGKEVAAND PTAVGSVKNI GNGVIEFDPA ENYSSFVGDD
VSFNVRAQDG GMALTRSVTV KVNPIEDAPI IVIDDAEVSI VDDNYTIYVE EDTSAQLGFK
APIIGDLGIE NGTLDILNPD YLVANTGNDD DLENGGSVDR SERLGAITLS GIPDRAELFY
MDSDNTKQVV YAVTDTAGSV TITLTDGIHI LDSEMSFDKE MTTEQFESLQ IAAPANSGTN
FDVFMSVTEY EVDENNTPLS TDKGFVTTTA TIIVDVQAVT DAPVIDLVGN NEVTVGANLI
TASIDEDTTL SLQNVINERF EDKDGSERYQ YQITGLPEAT TVVIAGQTLT AGSNGTVTSS
FKTVNMNTDP VIDMTPPQDY AGVIEATLTL ITKDREPNGE KDITDKDDSS ANIAEQSTSV
ELELTVNPKH DIEVATPGEG KEDTQIALFK DENGDPIITV TDADGSEMIT SVGISKQQVD
DFISAGGKFI IDINGTEQPV DTFIELPTQP GFYQFYGDSV SGIVDLLDIT IVPPAHSSKD
IDFTYYVETT DTSIGAGALA QTDGDTFDRT IKVTPVAESV DTDSDGANGN DVTMNPDYTY
TSTIYEDGDH DDDSSTAPDW FNLNDGIDLK AAWSNEDQSS LTNGTGSVYT DSEETFARLT
VQIEDSQNPG SFAKAAGAQF RYELNGNTVE VTAGKDGIDV PAVALDTLKF IAPPNYAGEV
QIVVNAVTID YDEDDDTATQ ETVSGESILS MTVTAVADDV LLSVQPARGF EDAGRSKGNP
PEDVDPTYIP SGFIDMPENG IPLKIKAQSE DKDDSETFNI TIENLPDGSA LYVYDAVSHT
YILVAQNYTG AIDSFTLNDA DSTDGAWSIT LNDYDNSQVP MFIPPSNSSN NYELLVSGES
VDGTDVASIN SAPLILPIKI ATVPDKILND ELNTVETAGL DGFEDAAADS YTLIEEESNI
DANNNQIEFK SIFQTPEDIG SYDTDGSEVV TYVITGLDDR FSMIGADVTY LGGAGIARQW
VVTKEAVETG DARIQLNEDF AGEINFTVQG ISTEQEGGSE TTQNLRSVSI FVTSDAADNN
VGNPVVTQTE NESVVLDLQG VFNKTDSPVD ARNGVEALKS VDINVTDLEA LGVQLIVDGT
PITDTLANSD GFYTIERDAD GNLPVVSIQA LPDNSEAGYV NHKSGDDVYS FAIKYNVTDT
VYNTQSITDP NAAVVYQEET VKDAIYKVNV TAKTDAPEIP DSDRVALETA ESINLDTTNG
NPISDSFTKT VALSSPDQDG SEKFTRIEVG NVPNGLQVEV DAGSGFVAAI KAGNTWYVDF
ADEPITDIAP SVDVRFSIKQ GYDVDAVTDQ TITVTAFNQD APDTEKSANA SFKLSITPAD
GDTVGNENPD LVANITVDPI VLTEDTADQN LGNFVTGTMN EAAYANNGTR LPLSFTIANL
PDDVVLELTD TNLGSLSKQG NLWLISGEAA SDSDITNLLS SITISPTNDY STNNAGETVT
LDISLTATDN NGDSETETAD PTTSTLVVRP VTDFMDFNTE GAVTTEQIAL DEDETLPLTL
DLSNTADAGN VVVTEGRIYL KVSDGNTILG ELTDTSGTVL TEVTDPAGLA AGTYYVLEVD
TNNPTGADFN FMPAANEDGT LNIEAYVVHK ESTDIDGYDT GTKVSRKDFE ITVSKAPDIL
TLAVDETASQ IAVNEDSAVS IQYNIVQADE DDVAKTFILE NVNDDFNVVY FSNGTEKAAT
KTGIGTWSVP STSNDPTPEI QIRTPEHFSG VSSVDISVLS DSGLQGAATT VDLTFTAVAD
PVEMTAQNSA GQAYEWVELN TNIKMTDDDG SETLTLTIAP AAGKPFQDTM LFRIGDDGTV
MGLNNASADA DGVAISFDGT NYRLTGIPAD KVNDIQILSH DYSGEVTYTT QSVETSNDDA
SAEVVGTANL NLSNSVEINT GAQNDTITGG NGNDVINAGA GDDVIYGKAG NDTINGGEDD
DDLKGAEGND ILNGGAGDDT LRGGSGDDYL DGGAGEDGLY GDTDNDTLVF DSANRFMNGG
DGVDALLLPA ASSTFDFNSL IGTVTNSSLN KVSNIEVLDL SGADFTITEL TANAVIQITD
ENNHLEIDGD NSDSVQLTGN WEQGATSGGY TSYSLNDTTI SIDTGITIL
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