Gene PsycPRwf_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1348 
Symbol 
ID5205135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1644347 
End bp1645168 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content39% 
IMG OID640599566 
Producthypothetical protein 
Protein accessionYP_001280243 
Protein GI148653150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000841172 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000779322 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTAATAC AAACAAATTT ATCAGCTGTT AAAGCCAATC AAGGTACACC GGTGGATGTG 
GTCGAAGAAT GGTTAAAAGA GAATGGGAGA GTCGAATCGC TCCCTGATAA TTTAGTGAAA
GGTGATTCTT ATTTTAATAA TGTAAACACC AAGGAGATTC AAAAGAGACA AATTAAAAAC
AAACAACGTG CACGTGATTT GCATGAGGCA ATCGTTAGTG TGGCTGGCAA TCTACCAAAG
AGCAAGGCTC GTGAGATTGA TTTTTCAGAC GAGCATTACA CTAACTTGGT TAGCCAGGTT
AAAAGTAGAT TTTTTAATGG GGAATTAGTT AAAGCAACTG ATTATAAAGG CGTTTATGCA
ATATCAACAA TGAGTTGCAT CCTATCGTGG ATAGCCGCAG ATTTAAGATC AAAAGGCTTT
GAGATCGTTA CTCTAAAAAC TGAAGCCAAA CGAAACCTTG GTTGGATTAC TGAAAGCGCG
TTAAATGAAA GGCTTTTGAC TAAAAAGAAT GCTGAAGCTG TTCGCAAACG TCTAGAGCCA
ATCAATGACT TATCTAGCCA GCAGATCTAT CACCAAACGA TTGCAGAGAT TGCACAAAGA
ATATTAGCAG GCCAATTTGT AAGAGTTGAA GAATACACTG CTAGGCATTC AAGAGTTGTT
ACCCTAAGAA TGGTTGCACT GGCTCTCAAA AAATCAAACA TAGTAAATGA TGTGGTATCT
GTTAACTATG AGCGCGGAAG AAAAGCTGGT TGGGTGCTCG AATCTGAGGT GCATAAAAAG
CTCACCAAGG TAAATGACTG CCCTCAAACT GAGGAGGCAT AA
 
Protein sequence
MLIQTNLSAV KANQGTPVDV VEEWLKENGR VESLPDNLVK GDSYFNNVNT KEIQKRQIKN 
KQRARDLHEA IVSVAGNLPK SKAREIDFSD EHYTNLVSQV KSRFFNGELV KATDYKGVYA
ISTMSCILSW IAADLRSKGF EIVTLKTEAK RNLGWITESA LNERLLTKKN AEAVRKRLEP
INDLSSQQIY HQTIAEIAQR ILAGQFVRVE EYTARHSRVV TLRMVALALK KSNIVNDVVS
VNYERGRKAG WVLESEVHKK LTKVNDCPQT EEA