Gene PsycPRwf_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1323 
Symbol 
ID5205720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1620255 
End bp1620746 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content38% 
IMG OID640599541 
ProductLrgA family protein 
Protein accessionYP_001280218 
Protein GI148653125 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATC TTAATCTTCG TCTATCCCCC TGTTTTTTAG CTAAAACAAA ACTGGCACTT 
CAAAGGTTCT ATGGTCAATC CTGGCTTTAT GTGCTTATAC AATGCGTTAT TATCGCAGCG
GTTTGGTATT GTGCCGAGAT ATTAGTTGAA TTATTGCATC TACCTTTATC CTCAGGCCTA
TTGGGAATGT TTTTAATGCT GATATTATTA ATGAGCGGTG CTATTAAGGT TAGCTGGGTC
AGAGTGGGAG CAAAATTTGT TTTGGGCGAA TTAGTATTAA TGTTCATCCC GCTTATGATG
TCAATACTTC AATATAAGGA GTTGTTTGTC AGTAAAGGAT GGCAATTAAT GCTGACCATT
ATCTTGAGTA CCGCGATGGT GATGTTAAGC TCAGCATTAA CTTTTATCAT GGTGCGTCGT
TTGCAGCGGA GACTGTATCG TCATCAGATT CATAAAGCCC ATTTAAACCT AAAAAATGAT
GATAATGTGT GA
 
Protein sequence
MRNLNLRLSP CFLAKTKLAL QRFYGQSWLY VLIQCVIIAA VWYCAEILVE LLHLPLSSGL 
LGMFLMLILL MSGAIKVSWV RVGAKFVLGE LVLMFIPLMM SILQYKELFV SKGWQLMLTI
ILSTAMVMLS SALTFIMVRR LQRRLYRHQI HKAHLNLKND DNV