Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1323 |
Symbol | |
ID | 5205720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1620255 |
End bp | 1620746 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640599541 |
Product | LrgA family protein |
Protein accession | YP_001280218 |
Protein GI | 148653125 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTAATC TTAATCTTCG TCTATCCCCC TGTTTTTTAG CTAAAACAAA ACTGGCACTT CAAAGGTTCT ATGGTCAATC CTGGCTTTAT GTGCTTATAC AATGCGTTAT TATCGCAGCG GTTTGGTATT GTGCCGAGAT ATTAGTTGAA TTATTGCATC TACCTTTATC CTCAGGCCTA TTGGGAATGT TTTTAATGCT GATATTATTA ATGAGCGGTG CTATTAAGGT TAGCTGGGTC AGAGTGGGAG CAAAATTTGT TTTGGGCGAA TTAGTATTAA TGTTCATCCC GCTTATGATG TCAATACTTC AATATAAGGA GTTGTTTGTC AGTAAAGGAT GGCAATTAAT GCTGACCATT ATCTTGAGTA CCGCGATGGT GATGTTAAGC TCAGCATTAA CTTTTATCAT GGTGCGTCGT TTGCAGCGGA GACTGTATCG TCATCAGATT CATAAAGCCC ATTTAAACCT AAAAAATGAT GATAATGTGT GA
|
Protein sequence | MRNLNLRLSP CFLAKTKLAL QRFYGQSWLY VLIQCVIIAA VWYCAEILVE LLHLPLSSGL LGMFLMLILL MSGAIKVSWV RVGAKFVLGE LVLMFIPLMM SILQYKELFV SKGWQLMLTI ILSTAMVMLS SALTFIMVRR LQRRLYRHQI HKAHLNLKND DNV
|
| |