| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1298 |
|---|
| Symbol | |
|---|
| ID | 5206725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1593277 |
|---|
| End bp | 1594143 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640599517 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_001280194 |
|---|
| Protein GI | 148653101 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02167] bacterial surface protein 26-residue repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAGTATCACA TGATGAAATG GTGAAATTTA CAGAGGGTTT GGCGGGTATT
TTTGGTCAGG GTATGAAGGA AGTATTTGGC CAACTTGATC AAATCAAAGC CAATTTAAGA
GGCTTGGAAG ATAAGGTCGA AATCCTTATG AACATGCCAG ACGTTGAGGT TGAGCCGCCC
GCTATGAACG ACGTAGGCCT AGATAAAGAC TATCCCGGTC ATGGTTGGTA TAAAGCCACT
GATACCGGTA TTGTCTATAA CTTTGGCGTA CCAGAGGGTG AGACTCATGT ATTCTCGGAC
GGCGATCCAA CAGCGTATTT GAGCGTTTAC ACTAAAGAGG ACGCAGTAGA TAATATTTAT
ATTGCGGCCA CGTCAAATGT AACTGATTTA AGCTCCGCTT TTTTCAATGA AGAAGAGTAC
AAATCGACTT ATATTGGTCA AAACCTATCT CACTGGGATG TATCAAACGT AACTAACTTT
GAGAAAACGT TTTTCTATGC TCAAACCCAA GATATTGTAG GTATTGAAAA CTGGAAAACA
AGCTCAGCAA TTAATATGGA CAGCATGTTT GCTATTGCTA ATACCTTCAA TACAGATATT
AGCGGCTGGG ACGTATCAAA CGTAACCAAC ATGAAAAGCA TGTTTACGCA GGCAAGTTCT
TTTAACCAAG ATATCAGCGG TTGGAACGTG TCAAATGTTG AAAACATGAA TAACACATTC
AACTTTGCCG GTGAGTTCAA TCAAGATCTA TCTGAGTGGT GTGTGCTTAA AATCCCAACT
CGACCCGAAG GTTGGGAAGG CTATGAAAAT ATCGTACCTC CAGTTTGGGG AACCTGCCCG
CGCGGTGAGG TACAACAAAT GAGGTAG
|
|---|
| Protein sequence | MKKLVSHDEM VKFTEGLAGI FGQGMKEVFG QLDQIKANLR GLEDKVEILM NMPDVEVEPP
AMNDVGLDKD YPGHGWYKAT DTGIVYNFGV PEGETHVFSD GDPTAYLSVY TKEDAVDNIY
IAATSNVTDL SSAFFNEEEY KSTYIGQNLS HWDVSNVTNF EKTFFYAQTQ DIVGIENWKT
SSAINMDSMF AIANTFNTDI SGWDVSNVTN MKSMFTQASS FNQDISGWNV SNVENMNNTF
NFAGEFNQDL SEWCVLKIPT RPEGWEGYEN IVPPVWGTCP RGEVQQMR
|
|---|
| |