Gene PsycPRwf_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1281 
Symbol 
ID5206870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1576383 
End bp1578194 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content44% 
IMG OID640599500 
Producthypothetical protein 
Protein accessionYP_001280177 
Protein GI148653084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCTT TACAGAAGAT AGAACTGGTG AAGCAGCTCA AGGCTGCTAT ATCAGACGCT 
AAAAACCTTG ATGGGTTAAA GCGCCTTGAT GAAATAAAAA GAGTTATGCA GCTTAGAACT
GATCTTGGCT TATCTGTTAA ATCAGATAAT TCAAACAGCC AAACCAACCA GGTAAACAAG
GTTATTAAAG GACGCAATAA TAACGTTAAA ACAGCAAAGG GGAGTAGGGT GTCAACGATC
CTAGCCGTAA CTGAAATTGA TAACGTCATT GCTAGTCACA CGGCAAGCGG CAGCCAGAAC
CCAATATATC CGCAAGAATT ACAGCCTCGT GATCGTGGCC GTGATTCATC AGTCGCATGG
GTGCAAAAAG TATCACGTGA TCTTGACCCT GAAAGCTTAG GGCGTTCTGG CAGGGCTGAT
AGTGGAGCGC CTATTGTCGG TGATGATATG GCCGTGGAAA GTGGTAACGG CCGAACTATG
GCAATAGCTA TGGCTTATGA CAATGGCACA GCCGATGATT ATAGGGATTG GCTCATTGAT
GAAGCCGACT ACCTGGGGTT TAGCCCCAAA GACGTAGAAG CATTTAAACG GCCAATACTG
ATTAGGATTA GAACCAGCGA GGTTGATCGA GTTAAGTTTG CTATTGAGGC CAACCAGGAC
GATAAGCTGT CATACAGTGC AACAGAGCGA GCCAAGACGG ACGCTAAAAT GCTAGATGAC
CACATGCTCA TGCTATTCAA TCCAAGTGAA AACGGGGATT TAACGGCAGC TAGTAACCAT
AACTTTGTTA TTGCCTTCTT AAAGCAATTA GGCGATACAG AGGCGGCCCA GTACACCACA
AAAGACGGTA AGCCAACACA AGCGCTGGTA GCACGCATGA AGGCGGCCAT TTTTAGCAAG
GCCTACAATG ACGAGCGATT AACGGAAATG ATGGCCGATG ACGCAAAGCC AGAGCTACAA
AACGTACTAA ATGCCTTGAG CGTGGCCGCA CCTAAGTTTA TTGAGGCTCA AGCAATCAGC
CGCGGCAATG TCCAAGATAT ATCTAGCGAG ATTGTAGATA GCATTGAAAA GGGCCTTGAT
GACCAGGTTA CAAACGCAAT CATTGACGCA ACCAATGTCG TTATCAGTGC CAAGGATAAC
AACCAGGACG TTGCAGAATA TGTTAAGCAG TTAGGACTAT TTAGCGACCT GGAAGAAGGC
GTGGCCGAAA TAGCCGTGTT TATTGCTACA AACAACCGTA GTGCAAAAAA GATGGGATTA
TTTTTTAAAG CCATGGCCGA GTTTTGTGAA AAAGAGTCTC AACACGGCCT CGCTGATGAT
TTATTTGGCT CACCACCTGT TAGTACCAAA GACGCTGCTA ACTATGCAGT TGATAAGGTT
CAAAGTATTT ACGGTAACGA CAAAGGGTTA GATATGTTCG ACTCAATGAC ACTAACACCG
CTTGAAAAAC TTAAAAAGAT TAAAGAGCTT AAATCAGCCG TATCAGACGC CAAAACATTA
GGTAATTTGC AAAAGCTACA AGCGCTTAAA AAGATTATGC AGTTGCGTAA GGATTTAGGC
CTAGTAAGCA ATAAAGAAAA CGAAACTGAT TACCTTGGCG AACAGGTTAA AAACCTTAGC
GACAAAGTAT CAGAAAGCAG CTTTGACCCA CTGGAATTTG ATAGTGACTT TGCAAAAGAG
CTGGCTGGCA AGATTGAAGA GGCAGATAGG CCTGATCTTG TACAGATTTT CAAAGATACA
CTTGAACATT ATCGTGACTT ATTGGTGTCT TTAGCTATTG AGAGTTTGCA GAAAACTAAA
GCGGTAGAGT AA
 
Protein sequence
MTPLQKIELV KQLKAAISDA KNLDGLKRLD EIKRVMQLRT DLGLSVKSDN SNSQTNQVNK 
VIKGRNNNVK TAKGSRVSTI LAVTEIDNVI ASHTASGSQN PIYPQELQPR DRGRDSSVAW
VQKVSRDLDP ESLGRSGRAD SGAPIVGDDM AVESGNGRTM AIAMAYDNGT ADDYRDWLID
EADYLGFSPK DVEAFKRPIL IRIRTSEVDR VKFAIEANQD DKLSYSATER AKTDAKMLDD
HMLMLFNPSE NGDLTAASNH NFVIAFLKQL GDTEAAQYTT KDGKPTQALV ARMKAAIFSK
AYNDERLTEM MADDAKPELQ NVLNALSVAA PKFIEAQAIS RGNVQDISSE IVDSIEKGLD
DQVTNAIIDA TNVVISAKDN NQDVAEYVKQ LGLFSDLEEG VAEIAVFIAT NNRSAKKMGL
FFKAMAEFCE KESQHGLADD LFGSPPVSTK DAANYAVDKV QSIYGNDKGL DMFDSMTLTP
LEKLKKIKEL KSAVSDAKTL GNLQKLQALK KIMQLRKDLG LVSNKENETD YLGEQVKNLS
DKVSESSFDP LEFDSDFAKE LAGKIEEADR PDLVQIFKDT LEHYRDLLVS LAIESLQKTK
AVE