Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1281 |
Symbol | |
ID | 5206870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1576383 |
End bp | 1578194 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599500 |
Product | hypothetical protein |
Protein accession | YP_001280177 |
Protein GI | 148653084 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCTT TACAGAAGAT AGAACTGGTG AAGCAGCTCA AGGCTGCTAT ATCAGACGCT AAAAACCTTG ATGGGTTAAA GCGCCTTGAT GAAATAAAAA GAGTTATGCA GCTTAGAACT GATCTTGGCT TATCTGTTAA ATCAGATAAT TCAAACAGCC AAACCAACCA GGTAAACAAG GTTATTAAAG GACGCAATAA TAACGTTAAA ACAGCAAAGG GGAGTAGGGT GTCAACGATC CTAGCCGTAA CTGAAATTGA TAACGTCATT GCTAGTCACA CGGCAAGCGG CAGCCAGAAC CCAATATATC CGCAAGAATT ACAGCCTCGT GATCGTGGCC GTGATTCATC AGTCGCATGG GTGCAAAAAG TATCACGTGA TCTTGACCCT GAAAGCTTAG GGCGTTCTGG CAGGGCTGAT AGTGGAGCGC CTATTGTCGG TGATGATATG GCCGTGGAAA GTGGTAACGG CCGAACTATG GCAATAGCTA TGGCTTATGA CAATGGCACA GCCGATGATT ATAGGGATTG GCTCATTGAT GAAGCCGACT ACCTGGGGTT TAGCCCCAAA GACGTAGAAG CATTTAAACG GCCAATACTG ATTAGGATTA GAACCAGCGA GGTTGATCGA GTTAAGTTTG CTATTGAGGC CAACCAGGAC GATAAGCTGT CATACAGTGC AACAGAGCGA GCCAAGACGG ACGCTAAAAT GCTAGATGAC CACATGCTCA TGCTATTCAA TCCAAGTGAA AACGGGGATT TAACGGCAGC TAGTAACCAT AACTTTGTTA TTGCCTTCTT AAAGCAATTA GGCGATACAG AGGCGGCCCA GTACACCACA AAAGACGGTA AGCCAACACA AGCGCTGGTA GCACGCATGA AGGCGGCCAT TTTTAGCAAG GCCTACAATG ACGAGCGATT AACGGAAATG ATGGCCGATG ACGCAAAGCC AGAGCTACAA AACGTACTAA ATGCCTTGAG CGTGGCCGCA CCTAAGTTTA TTGAGGCTCA AGCAATCAGC CGCGGCAATG TCCAAGATAT ATCTAGCGAG ATTGTAGATA GCATTGAAAA GGGCCTTGAT GACCAGGTTA CAAACGCAAT CATTGACGCA ACCAATGTCG TTATCAGTGC CAAGGATAAC AACCAGGACG TTGCAGAATA TGTTAAGCAG TTAGGACTAT TTAGCGACCT GGAAGAAGGC GTGGCCGAAA TAGCCGTGTT TATTGCTACA AACAACCGTA GTGCAAAAAA GATGGGATTA TTTTTTAAAG CCATGGCCGA GTTTTGTGAA AAAGAGTCTC AACACGGCCT CGCTGATGAT TTATTTGGCT CACCACCTGT TAGTACCAAA GACGCTGCTA ACTATGCAGT TGATAAGGTT CAAAGTATTT ACGGTAACGA CAAAGGGTTA GATATGTTCG ACTCAATGAC ACTAACACCG CTTGAAAAAC TTAAAAAGAT TAAAGAGCTT AAATCAGCCG TATCAGACGC CAAAACATTA GGTAATTTGC AAAAGCTACA AGCGCTTAAA AAGATTATGC AGTTGCGTAA GGATTTAGGC CTAGTAAGCA ATAAAGAAAA CGAAACTGAT TACCTTGGCG AACAGGTTAA AAACCTTAGC GACAAAGTAT CAGAAAGCAG CTTTGACCCA CTGGAATTTG ATAGTGACTT TGCAAAAGAG CTGGCTGGCA AGATTGAAGA GGCAGATAGG CCTGATCTTG TACAGATTTT CAAAGATACA CTTGAACATT ATCGTGACTT ATTGGTGTCT TTAGCTATTG AGAGTTTGCA GAAAACTAAA GCGGTAGAGT AA
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Protein sequence | MTPLQKIELV KQLKAAISDA KNLDGLKRLD EIKRVMQLRT DLGLSVKSDN SNSQTNQVNK VIKGRNNNVK TAKGSRVSTI LAVTEIDNVI ASHTASGSQN PIYPQELQPR DRGRDSSVAW VQKVSRDLDP ESLGRSGRAD SGAPIVGDDM AVESGNGRTM AIAMAYDNGT ADDYRDWLID EADYLGFSPK DVEAFKRPIL IRIRTSEVDR VKFAIEANQD DKLSYSATER AKTDAKMLDD HMLMLFNPSE NGDLTAASNH NFVIAFLKQL GDTEAAQYTT KDGKPTQALV ARMKAAIFSK AYNDERLTEM MADDAKPELQ NVLNALSVAA PKFIEAQAIS RGNVQDISSE IVDSIEKGLD DQVTNAIIDA TNVVISAKDN NQDVAEYVKQ LGLFSDLEEG VAEIAVFIAT NNRSAKKMGL FFKAMAEFCE KESQHGLADD LFGSPPVSTK DAANYAVDKV QSIYGNDKGL DMFDSMTLTP LEKLKKIKEL KSAVSDAKTL GNLQKLQALK KIMQLRKDLG LVSNKENETD YLGEQVKNLS DKVSESSFDP LEFDSDFAKE LAGKIEEADR PDLVQIFKDT LEHYRDLLVS LAIESLQKTK AVE
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