Gene PsycPRwf_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1263 
SymbolcysS 
ID5205975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1553778 
End bp1555295 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content47% 
IMG OID640599482 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_001280160 
Protein GI148653067 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.227331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0688568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCAC CTGCCAAAAT CGCACAAACT CCTGAATTTT TATCAAAACA GCTACTGCAA 
CAGCAGGCGG CATTGAAGAT CTATGATTCG ATGACCACCA ACAAGCGCAG CTTTGAGCCA
TTACAAGCGG GTAAAATTGG CATGTATGTG TGCGGTATGA CAGTTTATGA TTATTGTCAT
ATTGGTCATG CGCGCGTCAT GGTCGCTTTT GATGTGGTGT CTCGCTGGTT GCGTCATCTG
GGTTATGAGG TTAATTATGT GCGCAACATT ACAGATATTG ATGACAAGAT TATTGCGCGT
GCCAATGAAA ATGGTGAGCC GATTGGTGAG TTGACCCATC GCTTTATTAA AGCGATGCAT
GAAGATGCGG CAGCTTTGGG CTGTGAAAAC CCCGATGCTG AGCCACGCGC CACCGAGCAC
ATTGATGAGA TGCTTGATAT GATTGGCACG CTTGAGCAAA AACAGCATGC TTATGCCGCC
TCTAATGGTG ATGTCTATTA TGCCGTTGAT ACCTTTGAAG GATATGGCAA GCTGTCTAAG
CGCAAACTAG AGGACTTGCA AGCCGGCTCA CGTGTGGATG TGGACACCGA TAAGAAAAAC
CCATTTGACT TTGTGCTATG GAAGGCGGCC AAAGCCGGTG AGCCTCAGTG GGCATCAAGC
TGGGGTGGTG GCCGACCTGG GTGGCACATT GAGTGCTCGG CCATGTCGAC TAAGTGCTTG
GGTAATAGCT TTGATATCCA TGGCGGCGGT CACGACTTAC AGTTCCCGCA TCATGAAAAT
GAGATTGCCC AATCCGAAGC GGCTACGGGC TGCACGTATG CTCATAACTG GATGCATGTG
GGCTTTATTA ACGTTGATGG CGAAAAAATG TCCAAATCAT TGGGCAACTT CTTCACCATT
CGTGAAGTGA TGCAGAAGTT TCATCCTGAG ACCATCCGCT TCTTTATTTT ATCAAGTCAT
TATCGCAGTC AGGTGAACTT CTCTGATGCG GCGTTAAAAG AAGCACATTC TGGTTTGACC
CGTATCTATC AAGCCCTAAA GGCAGCCGAT GCCGTACTAA ATACTTCAGT AAGTGCCGCT
GAGTCTATTG AGTCTATCAA TGCTGAGCAC GCCGGTACCC ACAGTGCTGA CTTTATCGCC
GCGATGAACG ATGACTTCAA TACCCCGCAG GCCATTAGTG TGTTATTTAG CTTGGCAAAA
GAGGTCAATA AACTGGCCCG TGACGCGGAT GATGCTGACA CACAGGCTCA ATTACAACTG
CAAGCTGTTC AACTAAGAGC GCTGGCAGGC ATCTTAAATA TTGGTCAGTT AAATCCTGCC
GAGTTCTTAC AGGCACAAAT TGGTGAGGTG GCAGAGGACC AAATGAGTGA TGAGCAAATT
GAAGCGTTAA TTCAAGAGCG CCTCGACTCT AAGGCCAATA AAAACTTTGC ACGTGCTGAT
GAGATTCGTG ATTTATTGCA AAATAGCGGT ATTGAGCTTG AAGATGGTAA GCTTGGTACC
ACGTGGCGCC GCACCTAA
 
Protein sequence
MSSPAKIAQT PEFLSKQLLQ QQAALKIYDS MTTNKRSFEP LQAGKIGMYV CGMTVYDYCH 
IGHARVMVAF DVVSRWLRHL GYEVNYVRNI TDIDDKIIAR ANENGEPIGE LTHRFIKAMH
EDAAALGCEN PDAEPRATEH IDEMLDMIGT LEQKQHAYAA SNGDVYYAVD TFEGYGKLSK
RKLEDLQAGS RVDVDTDKKN PFDFVLWKAA KAGEPQWASS WGGGRPGWHI ECSAMSTKCL
GNSFDIHGGG HDLQFPHHEN EIAQSEAATG CTYAHNWMHV GFINVDGEKM SKSLGNFFTI
REVMQKFHPE TIRFFILSSH YRSQVNFSDA ALKEAHSGLT RIYQALKAAD AVLNTSVSAA
ESIESINAEH AGTHSADFIA AMNDDFNTPQ AISVLFSLAK EVNKLARDAD DADTQAQLQL
QAVQLRALAG ILNIGQLNPA EFLQAQIGEV AEDQMSDEQI EALIQERLDS KANKNFARAD
EIRDLLQNSG IELEDGKLGT TWRRT