Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1258 |
Symbol | |
ID | 5205833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1546676 |
End bp | 1547491 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599477 |
Product | exonuclease III |
Protein accession | YP_001280155 |
Protein GI | 148653062 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000275406 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0123433 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTT TTGTCAGTTT TAACATTAAT GGTATTAGAG CCCGTCAACA TCAATTAGAA GCGGTAAGAG ATATTATCGA CCCTGATGTG ATGGGACTGC AAGAAACCAA GGTTCATGAT GAGCAATTCC CTTTAGAACT GGTAGAGTCA CTGGGATATC ATGTGGAGTT TTTTGGTCAA AAAGCTCATT ATGGGGTGGC TTTGGTGTCT AAAGTAAAAC CCATATTCGT CCAAAAAGGC TTTCCTGATG AGCCAGAAGA TGCCCAAAAA CGTTTCATTC ATGCCCGCTA TGTGTTTAAC GGGCAAGAGG TGGATGTGTT AAATGGCTAT TTTCCCCAAG GTGAAAGCCG CAACCATGAA ACCAAGTTTC CTATGAAGCG CGCTTACTAT GCTGATTTAA ACCAGTATAT TGATGCCCTA AAGGCAGAAG GTCGCACCCT TATCATTATG GGTGATATGA ACATTGCGCC GGAAGATAAT GACATTGGCA TTGGTGAAAA AAATGCCAAA CGGTGGTTAA GCCAAGGCAA AACCTCGTTT TTACCTGAGG AGCGTGAGTG GTACAGTGCG CTTATGAGCC GTGAGTTATC AGACACTTAC CGTATCCATT ATCCAGACGC CAATGACACC TTTAGCTGGT TTGACTACCG TAGTCGCGGC TTTGATGATG ACCCTAAGCG TGGCCTAAGG ATTGATCATA TTTTGTGTAC TCAAGATATT GAGGACAAAT GTATTGATGC TGGTATCAGC TATGAGCTGC GTGCTATGGA GAAGCCCTCG GATCATGCGC CAATTTGGGC TTCATTTAAG TTCTAA
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Protein sequence | MTRFVSFNIN GIRARQHQLE AVRDIIDPDV MGLQETKVHD EQFPLELVES LGYHVEFFGQ KAHYGVALVS KVKPIFVQKG FPDEPEDAQK RFIHARYVFN GQEVDVLNGY FPQGESRNHE TKFPMKRAYY ADLNQYIDAL KAEGRTLIIM GDMNIAPEDN DIGIGEKNAK RWLSQGKTSF LPEEREWYSA LMSRELSDTY RIHYPDANDT FSWFDYRSRG FDDDPKRGLR IDHILCTQDI EDKCIDAGIS YELRAMEKPS DHAPIWASFK F
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