Gene PsycPRwf_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1258 
Symbol 
ID5205833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1546676 
End bp1547491 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content44% 
IMG OID640599477 
Productexonuclease III 
Protein accessionYP_001280155 
Protein GI148653062 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000275406 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0123433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT TTGTCAGTTT TAACATTAAT GGTATTAGAG CCCGTCAACA TCAATTAGAA 
GCGGTAAGAG ATATTATCGA CCCTGATGTG ATGGGACTGC AAGAAACCAA GGTTCATGAT
GAGCAATTCC CTTTAGAACT GGTAGAGTCA CTGGGATATC ATGTGGAGTT TTTTGGTCAA
AAAGCTCATT ATGGGGTGGC TTTGGTGTCT AAAGTAAAAC CCATATTCGT CCAAAAAGGC
TTTCCTGATG AGCCAGAAGA TGCCCAAAAA CGTTTCATTC ATGCCCGCTA TGTGTTTAAC
GGGCAAGAGG TGGATGTGTT AAATGGCTAT TTTCCCCAAG GTGAAAGCCG CAACCATGAA
ACCAAGTTTC CTATGAAGCG CGCTTACTAT GCTGATTTAA ACCAGTATAT TGATGCCCTA
AAGGCAGAAG GTCGCACCCT TATCATTATG GGTGATATGA ACATTGCGCC GGAAGATAAT
GACATTGGCA TTGGTGAAAA AAATGCCAAA CGGTGGTTAA GCCAAGGCAA AACCTCGTTT
TTACCTGAGG AGCGTGAGTG GTACAGTGCG CTTATGAGCC GTGAGTTATC AGACACTTAC
CGTATCCATT ATCCAGACGC CAATGACACC TTTAGCTGGT TTGACTACCG TAGTCGCGGC
TTTGATGATG ACCCTAAGCG TGGCCTAAGG ATTGATCATA TTTTGTGTAC TCAAGATATT
GAGGACAAAT GTATTGATGC TGGTATCAGC TATGAGCTGC GTGCTATGGA GAAGCCCTCG
GATCATGCGC CAATTTGGGC TTCATTTAAG TTCTAA
 
Protein sequence
MTRFVSFNIN GIRARQHQLE AVRDIIDPDV MGLQETKVHD EQFPLELVES LGYHVEFFGQ 
KAHYGVALVS KVKPIFVQKG FPDEPEDAQK RFIHARYVFN GQEVDVLNGY FPQGESRNHE
TKFPMKRAYY ADLNQYIDAL KAEGRTLIIM GDMNIAPEDN DIGIGEKNAK RWLSQGKTSF
LPEEREWYSA LMSRELSDTY RIHYPDANDT FSWFDYRSRG FDDDPKRGLR IDHILCTQDI
EDKCIDAGIS YELRAMEKPS DHAPIWASFK F