Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1251 |
Symbol | |
ID | 5205616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1540305 |
End bp | 1541255 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640599470 |
Product | transaldolase B |
Protein accession | YP_001280148 |
Protein GI | 148653055 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000493372 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00916637 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGAGTG CCTTATCTCA ATTACAGACC ATGACCACCA TTGTTGCTGA TACCGGTGAT TTAAGCGCCA TTGCACGCTT AAAACCAGTT GATGCAACGA CCAACCCTAG CCTCATTACC AAAGCACTCA CTCACCCTGA CAAGCAGGCC ATGTTATCTG ACACCCTAAA TCGCTATTCA AATCATGGCG AGGATATGAT TGATAAAGTA ATCGATGACT TGACCATCCA AGTGGGCTTA GACATCCTAA AACTTATCGA TGGCCGTGTG TCTACTGAAG TTGATGCCCG CTTATCTTAT GATACTGAAG CCACCATTGC CAAAGCGCAT GAATTTATGG AAGCGTATGC GCGTGCCGGC GTGGATAAAG AGCGCATCTT AATTAAGATT GCCGCCACTT GGCAGGGTAT TAAAGCGGCT GAACAGCTTG AAAAAGAAGG CATTCATTGT AACCTGACGT TGATTTTTGG TCAGCATCAA GCCGTTGCCT GTGCTGAGTC TGGCGTGACT TTGATTTCAC CTTTTGTGGG TCGTATTCTA GATTGGCAAA AGCGCGAGCA AAACCGTCAA ATTATCCCAA TTAGCGATGA TATGGGCGTG CAATCTGTGA AGCGTACGTA TCAGTATTAC AAACAGCACG GCTACAACAC ACAAGTAATG GGTGCAAGCT TTAGAAGTGT AGAGCAAATA CTTGCCTTGG CCGGTTGCGA TTTATTGACC ATTTCACCTG ACTTACTTGA TGAGCTAGCG GCTTTAGATA CCCCAGTTGA GCAAGTATTA TCACCTAAAA TGGCAAGTGA CATCATGCCA AAAGTCAGCC TAACTGAAGC ACAGTTTAAT GCCGCTTACG AACAAGATAG CATCACTCAG CACTTATTGC CCAAAGGTAT CGATGGCTTT ATCGCTGCTC GTGATGAGCT GGCCAAAGCC TTACAGCAAT TGGTAAAGTA A
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Protein sequence | MMSALSQLQT MTTIVADTGD LSAIARLKPV DATTNPSLIT KALTHPDKQA MLSDTLNRYS NHGEDMIDKV IDDLTIQVGL DILKLIDGRV STEVDARLSY DTEATIAKAH EFMEAYARAG VDKERILIKI AATWQGIKAA EQLEKEGIHC NLTLIFGQHQ AVACAESGVT LISPFVGRIL DWQKREQNRQ IIPISDDMGV QSVKRTYQYY KQHGYNTQVM GASFRSVEQI LALAGCDLLT ISPDLLDELA ALDTPVEQVL SPKMASDIMP KVSLTEAQFN AAYEQDSITQ HLLPKGIDGF IAARDELAKA LQQLVK
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