Gene PsycPRwf_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1239 
Symbol 
ID5205247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1526691 
End bp1527731 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content46% 
IMG OID640599458 
Productpeptidase M19, renal dipeptidase 
Protein accessionYP_001280136 
Protein GI148653043 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.120176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAA ATCAGATAGT TATAGATGGG CTGCAATACA GCAATTGGGA CAGAGATTAT 
TTTTTGATGC TAAAAGCCAG CGGTATTCAT GCGGTACATG CAACCTTGGT GTACCATGAA
GATGCCCGAG CAACACTAAC ACGTTTTGCC GAGTGGGATC AGCGCTTTGA GCAAAACTCG
GATGTCATCA TGCCGGTATA CAGTGCTCAG GATATTCAAA AAGCAAAAGA GGTGGGTAAG
GTAGGTATTT TATTTGGGGC ACAAAACTGC TCTCCAATTG AAGATGAGAT TGGCCTTGTT
AGTGTGATGC GCCAGCAAGG CCTACTTATC ATGCAGCTGA CGTATAACAA CCAAAGTCTA
TTGGCAACGG GCTGTTATGA AGCCAATGAC TCGGGTATTA CACGTTATGG TAAGCAAGTC
ATCGAGGAGA TGAACCGTGT TGGTATGATT ATCGATATGT CGCACAGTGC AGAGCGCTCA
ACGCTTGAGG CCATTGATTT GTCTGAGCGT CCTATCTGTA TCAGCCATGC TAATCCAACC
TTTGCTCATG ATGCGCTACG TAATAAGTCA GATACAGTCA TTAAAGCGTT AGCCTCGCGC
GGTGGTCTAT TAGGCTTTAG CTTATATCCT TTTCATTTGC CCAATGGCAG TGATTGCCGT
TTAGAGGACT TCTGTGCGAT GGTCGCCAAG ACAGCAGACA TGGTGGGTGT GGATCACTTA
GGTATCGGTA GTGATTTGTG CCTAAATCAG CCGCAATCTG TGCTGGAATG GATGCGTAAT
GGGCGCTGGT CTAAGCAGAT GGATTATGGC GAAGGCTCTG CCAATAATTC TGGTTGGCCA
GACTCTCTGC CGTGGTTTGC TGGCAGGGAT GGTATGCGTA ATATCTATAA GGGTCTACTC
AAAACTGGCT TTAACGATAA TGAGGCAGGG CAAATTATTG GCGGTAATTG GTATCAATTC
TTAGAGCGCT CTCTTGTACC TATGCCAGAG CTTAACAGCA GTTACCAAAA AGACCGTCAA
CGTTCTGAAG TAATCGCTTA A
 
Protein sequence
MFENQIVIDG LQYSNWDRDY FLMLKASGIH AVHATLVYHE DARATLTRFA EWDQRFEQNS 
DVIMPVYSAQ DIQKAKEVGK VGILFGAQNC SPIEDEIGLV SVMRQQGLLI MQLTYNNQSL
LATGCYEAND SGITRYGKQV IEEMNRVGMI IDMSHSAERS TLEAIDLSER PICISHANPT
FAHDALRNKS DTVIKALASR GGLLGFSLYP FHLPNGSDCR LEDFCAMVAK TADMVGVDHL
GIGSDLCLNQ PQSVLEWMRN GRWSKQMDYG EGSANNSGWP DSLPWFAGRD GMRNIYKGLL
KTGFNDNEAG QIIGGNWYQF LERSLVPMPE LNSSYQKDRQ RSEVIA