| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1214 |
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| Symbol | |
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| ID | 5206760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1493539 |
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| End bp | 1494309 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599434 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001280113 |
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| Protein GI | 148653020 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0262969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0773079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTG AAAGCGGCAC CGATAACCAA ATTGATAATA AAATAGATAT TATCTATGAA
GATGAGCATC TGGTAGCAAT TAATAAAGAA GCGGGTCTAT TGGTGCATCG CAGTTGGCTT
GATAAGGGTG AGACACGATT TGCAATGCAA CTAACCCGTG ATGCCGTAGG TTGCCATGTC
TTTCCAGTAC ATAGGTTAGA CAGGCCAACA TCGGGCGTAT TATTGTTTGC TAAGAGCGCT
GCTGTGGCAC GCAGCTTGAC CGAAGCTTTC ACTGAGCGCA AGGTTACTAA ACGCTATTTA
GCGGTGGTGC GCGGCTTTAT GACAGAGCAG GGCAGCGTTG ATTATGCGTT AAGCTTTAAG
CCCGATGCCA TCGCTGATAA GTTTGCCAAC TTAGACAAAC CTGCTCAAGA AGCGGTCACT
CACTGGCAGA GCTTAGCCCA GATTGAGCTG CCATTTGCAG TATCAAAAAA GCACGATACT
AGCCGCTATA GTCTTATGCG TTTAATACCT GAGACGGGGC GAAAACATCA GCTACGCCGT
CACATGAGAC ATTTGTTCCA TCACATCATA GGTGACACCA GCTACGGTGA CGGACGCCAC
AATAAATTTT TTCGTACTCA ATATGATTGC ACGCGCATGC TGTTACATGC TCAGACTTTA
TCGCTCACTC ATCCTGTTAC TGGCGAGCCG TTGATGCTCG AAGCAGGTTT TGACGATCAA
TGGACTCGAA TTTTGGAAGC GTTTTCTTGG ATAGATAGTG CAAAACCTTA G
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| Protein sequence | MDIESGTDNQ IDNKIDIIYE DEHLVAINKE AGLLVHRSWL DKGETRFAMQ LTRDAVGCHV
FPVHRLDRPT SGVLLFAKSA AVARSLTEAF TERKVTKRYL AVVRGFMTEQ GSVDYALSFK
PDAIADKFAN LDKPAQEAVT HWQSLAQIEL PFAVSKKHDT SRYSLMRLIP ETGRKHQLRR
HMRHLFHHII GDTSYGDGRH NKFFRTQYDC TRMLLHAQTL SLTHPVTGEP LMLEAGFDDQ
WTRILEAFSW IDSAKP
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