Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1194 |
Symbol | |
ID | 5206152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1459730 |
End bp | 1460989 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640599414 |
Product | manganese transporter NRAMP |
Protein accession | YP_001280093 |
Protein GI | 148653000 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAT CTTCGACTCA CGCCTCGCCC AAAGACAAAG GCATTAATTG GCAAGCTTTT GGTCCCGGTA TCTTACTGGC CTCAGCAGCC ATTGGGGGCT CACATCTTAT CTCATCGACA CAAGCTGGCG CGTTATATGG TTGGCAATTG GCGATTATGA TTATCCTCGC CAACTTTTTT AAATATCCCT TTTTTAAATT CGGTACCGAC TATGTTTATG AAACCGGAGA GTCGTTGGTT GCCGGATATG CCAAAAAATC ACGCCTATAT CTGTGGGCAT TTTTTATCTT ATCTTTGGCA GCTTCGGTCA TTAGCACCGG TGCAGTGGCG CTATTGGCGG CAGTTATTCT AGGGTTTATG TTGCCTGAAA GCTGGGGGCT ATCTAATGGT GTTTTGTCGA TTATCGTCAT GGGCGTGTCT TGGCTATTTT TGATTCTCGG TCACTACAAG ATGCTTGATA AGCTTACCAA ATGGATTATG GTGGCGCTGA CTGTGACCAC GTTAGCTGCG GTGATTATTG CGGCAGGCAA GCCTACCATT ATGGCACCAG ATTTTGTGGC CGCCTCACCT TGGAATTTGG CCACCTTGGG CTTTATTGTG GCCTTAATGG GCTGGATGCC GGCACCACTT GAGTTCTCAG CGATTAATTC TATGTGGATT TCGGCCAAAG TAAAATCGGA CCACACCACA CACCGTCAGG GCTTAATTGA CTTTAATGTC GGTTTTATCG CCACCTCTTT ATTGGCACTG GTATTTTTGG CATTGGGTGT GTTTGTACAG TATGGCTCAG GCGTTGAAAT CCAGACCCAA GGCGGTGCTT ATGTGGGGCA GCTGATTAGT ATGTATACGG CCACCATTGG TGAGTGGTCA CGTCTATTGG TAGCATTTGT GGCCTTTATG GTGATGTTTG GTACCACCAT TACCTGTGCT GATGGTTATG GCCGTATCAA TGCCGAAAGC TTACGTTTAA TCAAAGACGA TGCCAATATT TCACAACAGC AAATCATCCT GTGGACCACC TACTGTATTG TGGGCGGCTA TATTATTATC ACCTTCTTTA CCGGGCAGCT GGGCGCTATG CTAAAGTTTG CTATGATTAC AGCTTTTGTT TCAGCCCCAA TTTTTGGTTG GTTAAATTAC TCACTAGCCA AAGATCAGCA GCACCTATCA GCTGGCATGA AGCTGTACAG TATTGCCGGC TTGATCTTCT TAGGCGGTAT TGCTTTGTTG TTTATGGCGC AATTATTTGG CCTAATCTAA
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Protein sequence | MSTSSTHASP KDKGINWQAF GPGILLASAA IGGSHLISST QAGALYGWQL AIMIILANFF KYPFFKFGTD YVYETGESLV AGYAKKSRLY LWAFFILSLA ASVISTGAVA LLAAVILGFM LPESWGLSNG VLSIIVMGVS WLFLILGHYK MLDKLTKWIM VALTVTTLAA VIIAAGKPTI MAPDFVAASP WNLATLGFIV ALMGWMPAPL EFSAINSMWI SAKVKSDHTT HRQGLIDFNV GFIATSLLAL VFLALGVFVQ YGSGVEIQTQ GGAYVGQLIS MYTATIGEWS RLLVAFVAFM VMFGTTITCA DGYGRINAES LRLIKDDANI SQQQIILWTT YCIVGGYIII TFFTGQLGAM LKFAMITAFV SAPIFGWLNY SLAKDQQHLS AGMKLYSIAG LIFLGGIALL FMAQLFGLI
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