Gene PsycPRwf_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1186 
Symbol 
ID5205022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1450197 
End bp1451405 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content49% 
IMG OID640599406 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001280085 
Protein GI148652992 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAG TTGCCTATAT TTATGACGCC ATCCGCACAC CTCGTGGCAA GGGTAAGAAA 
GATGGCTCGT TACATCAAGC CTCTCCAATT TGGCTGGTTC GCACACTATT AAAACAGATG
CAGCAGCGCC ACAACTTAGA TACCAGTTTG GTTGACGATA TCGTGTTAGG CTGTGTCACC
CCAGTCGGTG AGCAGGGTTC TGACATTGCT CGTATTGCAG CGATTGATGC CGAGTGGCAT
CAAAGCGTGG CTGGGTTAAC TCTGTCACGC TTTTGTGCCT CTGGTCTGGA GTCAATTAAT
TTAGCCGCTA CCAAAGTTAT GTCTGGTATG GAAGATTTGG TGGTTGCCGG CGGTGTTGAG
TCTATGAGCC GTGTGCCTAT GGGCTCAGAT GGCGGTGCTT GGTATATGGA TCCTCGTGTC
AACGTTGCGA CTCAGTTTGC GCCACAAGGC GTTGGCGCTG ATGCCATTGC AACTTTGCGT
GGGTTTAGTC GTGAAGATGT CGATGCCTTT GCCACAGAGT CGCACAGAAG AGCAGCTGCT
GCTTGGGAGC AGGGCTACTA TGATAAATCC GTGGTGCCGG TAACCGACAT TAATGGTCTT
TTATTATTAG ATAAAGATGA AACCATTCGT CCTAATACTT CTGTAGAAAC CTTGGCAAAA
TTAAATCCCT CATTTGCTAT GCCTGGCAAG ATGGGCTTTG ATAGCGTTAT TCTTGATAAA
TACACCACAA TTGAGGATAT CAATCACGTT CACCATGCGG GCAACTCATC AGGTATCGTT
GATGGGGCTG CCTTGTGTCT AGTTGGTAGT AAAGCGGCTG GCGAGAAAGC CGGTCTGAGG
CCACGCGCTA AGATTACTAT GGCCTCTGTT ATCGGTTCAG AGCCTACCAT CATGTTAACC
GGCCCAACTC CAGCCTGTCA AAAAGCTTTG GATAAGGTGG GCATGAGTGC TGCTGATATC
GACCTTTGGG AAATCAACGA AGCCTTTGCT GCGGTTCCGA TGAATACTGC TGCAGACTTT
GGTGTTTCGC TAGATAAAGT CAACGTTAAT GGCGGCGCTA TCGCCATGGG TCATCCATTA
GGGGCAACAG GCGCCATGCT TTTGACCACT GTATTGGACG AGCTAGAACG CCGTGACCTA
AAGACGGCTA TGATCACGCT CTGTGTGGGT GGTGGCATGG GTATTGCGAC TATTATTGAG
CGTGTTTAA
 
Protein sequence
MTEVAYIYDA IRTPRGKGKK DGSLHQASPI WLVRTLLKQM QQRHNLDTSL VDDIVLGCVT 
PVGEQGSDIA RIAAIDAEWH QSVAGLTLSR FCASGLESIN LAATKVMSGM EDLVVAGGVE
SMSRVPMGSD GGAWYMDPRV NVATQFAPQG VGADAIATLR GFSREDVDAF ATESHRRAAA
AWEQGYYDKS VVPVTDINGL LLLDKDETIR PNTSVETLAK LNPSFAMPGK MGFDSVILDK
YTTIEDINHV HHAGNSSGIV DGAALCLVGS KAAGEKAGLR PRAKITMASV IGSEPTIMLT
GPTPACQKAL DKVGMSAADI DLWEINEAFA AVPMNTAADF GVSLDKVNVN GGAIAMGHPL
GATGAMLLTT VLDELERRDL KTAMITLCVG GGMGIATIIE RV