| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1179 |
|---|
| Symbol | |
|---|
| ID | 5206915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1441614 |
|---|
| End bp | 1442198 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640599399 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_001280078 |
|---|
| Protein GI | 148652985 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACA TATTAATCTT AAATGGCGGC AAAAACTTTG CCCATTCACA TGGCAAGCTT
AATGACACCA TGACGCAGGC GGCAAAAGCG CATCTGCTAG ATTTGGGGCA TCAGGTACAA
GTCACCCACA TTGATGCCGG CTATGAGGTA GAAGAAGAGA TACAAAAGTG GCTGTGGGCA
GATGTGGTCA TTCAGCAGAC GCCGGCTTGG TGGATGGGTG TGCCTTGGAT CGTCAAGAAG
TATATCGACG AGGTGTTCAC TCTAGGTCAC GGCCGCTTAT ATCAAAGCGA TGGGCGCACG
CGCCAAGACC CTGAGAAGAA CTACGGCTCG GGCGGATTAT TACAAGGCAA GCAGTATATG
CTTTCGGTGA CTTGGAATGC CCCTGCCATT GCCTTTACCG ACCCTAAGCA GTTCTTTGAG
GGTGCTGGCG TGGATGGGGT GTATATTGCC ACTCACAAGG CCTATCAATT CTTAGGCATG
ACCCCATTAC CCACTTTTAT GAGCAATGAT GTTATTAAAA ATCCGACCAT TGATAGAGAC
ATACAAGACT ATCAAGCGCA TTTGACGGCG GTTTTTGCCC AGTAG
|
|---|
| Protein sequence | MTNILILNGG KNFAHSHGKL NDTMTQAAKA HLLDLGHQVQ VTHIDAGYEV EEEIQKWLWA
DVVIQQTPAW WMGVPWIVKK YIDEVFTLGH GRLYQSDGRT RQDPEKNYGS GGLLQGKQYM
LSVTWNAPAI AFTDPKQFFE GAGVDGVYIA THKAYQFLGM TPLPTFMSND VIKNPTIDRD
IQDYQAHLTA VFAQ
|
|---|
| |