Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1165 |
Symbol | |
ID | 5205814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1423690 |
End bp | 1424508 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640599385 |
Product | integrase catalytic subunit |
Protein accession | YP_001280064 |
Protein GI | 148652971 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCCGCG TGCTAAGGGT TAAGCATTCA AGTTACTACG ACTGGCTGAG TCGCGATATC AGCGAGCAGC AGATACATCG CAACCATTGT GAGCTACTCG TTAAAGCCGC TCACAGTGAA ACTCATGAGC GCTATGGTGT TGAGCGTCTG CATGCGCATC TAAGTGAGCA AGGTCATAAC ATCAGTCCCT ACATGGTCAG AAGCATCAAA GAGGAATACA GCATCAAATG CCGTCGCCAC AAACGCTTTA AAGTCACCAC CGACTCCAAT CACAACAAAC TGGTCTATCC AAACGTGTTG GATCAAGAGT TTGATGCCAG TCGCCCTAAC CAAGCGTGGG CCAGTGACAT CACCTATATT TGGACGCTTG AGGGCTGGTT GTATTTAGCG GGAGTCAAAG ATTTATATAC CAAAGAGCTG GTCGGCTATG CGATCAATAA GCGAATGACC GCAGATCTAG TATGCAAAGC ATTGAACATG GCCATCAAGA ATAAACAACC AAGCAAAGGG CTAGTCGTTC ACTCTGACAG AGGCAGTCAG TACTGTAGCC ATGCTTACCA CAAGATCATC AAGCAGCATC AGTTTACAGG TTCAATGAGC GGTAAAGGCA ACTGCTTTGA CAACGCACCC ATAGAAAGCT TCTGGGGCAT ATTGAAGAAC GAGCTAGTAT ATCACCAAGA CTATAAAACA AGGTTTGCAG CTATCAGAGA TATCATTGGA TATATTGAGT TATATTATAA TCAGACTAGG ATTCAAAAGG GTTTAGGCTA TAAATCGCCA AGACAGGTGT GGTTTGATTA TTATCGTCAG GCTGCGTAA
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Protein sequence | MCRVLRVKHS SYYDWLSRDI SEQQIHRNHC ELLVKAAHSE THERYGVERL HAHLSEQGHN ISPYMVRSIK EEYSIKCRRH KRFKVTTDSN HNKLVYPNVL DQEFDASRPN QAWASDITYI WTLEGWLYLA GVKDLYTKEL VGYAINKRMT ADLVCKALNM AIKNKQPSKG LVVHSDRGSQ YCSHAYHKII KQHQFTGSMS GKGNCFDNAP IESFWGILKN ELVYHQDYKT RFAAIRDIIG YIELYYNQTR IQKGLGYKSP RQVWFDYYRQ AA
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