Gene PsycPRwf_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1165 
Symbol 
ID5205814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1423690 
End bp1424508 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content45% 
IMG OID640599385 
Productintegrase catalytic subunit 
Protein accessionYP_001280064 
Protein GI148652971 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCGCG TGCTAAGGGT TAAGCATTCA AGTTACTACG ACTGGCTGAG TCGCGATATC 
AGCGAGCAGC AGATACATCG CAACCATTGT GAGCTACTCG TTAAAGCCGC TCACAGTGAA
ACTCATGAGC GCTATGGTGT TGAGCGTCTG CATGCGCATC TAAGTGAGCA AGGTCATAAC
ATCAGTCCCT ACATGGTCAG AAGCATCAAA GAGGAATACA GCATCAAATG CCGTCGCCAC
AAACGCTTTA AAGTCACCAC CGACTCCAAT CACAACAAAC TGGTCTATCC AAACGTGTTG
GATCAAGAGT TTGATGCCAG TCGCCCTAAC CAAGCGTGGG CCAGTGACAT CACCTATATT
TGGACGCTTG AGGGCTGGTT GTATTTAGCG GGAGTCAAAG ATTTATATAC CAAAGAGCTG
GTCGGCTATG CGATCAATAA GCGAATGACC GCAGATCTAG TATGCAAAGC ATTGAACATG
GCCATCAAGA ATAAACAACC AAGCAAAGGG CTAGTCGTTC ACTCTGACAG AGGCAGTCAG
TACTGTAGCC ATGCTTACCA CAAGATCATC AAGCAGCATC AGTTTACAGG TTCAATGAGC
GGTAAAGGCA ACTGCTTTGA CAACGCACCC ATAGAAAGCT TCTGGGGCAT ATTGAAGAAC
GAGCTAGTAT ATCACCAAGA CTATAAAACA AGGTTTGCAG CTATCAGAGA TATCATTGGA
TATATTGAGT TATATTATAA TCAGACTAGG ATTCAAAAGG GTTTAGGCTA TAAATCGCCA
AGACAGGTGT GGTTTGATTA TTATCGTCAG GCTGCGTAA
 
Protein sequence
MCRVLRVKHS SYYDWLSRDI SEQQIHRNHC ELLVKAAHSE THERYGVERL HAHLSEQGHN 
ISPYMVRSIK EEYSIKCRRH KRFKVTTDSN HNKLVYPNVL DQEFDASRPN QAWASDITYI
WTLEGWLYLA GVKDLYTKEL VGYAINKRMT ADLVCKALNM AIKNKQPSKG LVVHSDRGSQ
YCSHAYHKII KQHQFTGSMS GKGNCFDNAP IESFWGILKN ELVYHQDYKT RFAAIRDIIG
YIELYYNQTR IQKGLGYKSP RQVWFDYYRQ AA