| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1157 |
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| Symbol | |
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| ID | 5206664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1413620 |
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| End bp | 1415881 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599377 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_001280056 |
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| Protein GI | 148652963 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00332446 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAG CCGTCAGCGA TGGCATCGAA TACGCGCTCA ATTGTAACTA CCGTTTGACG
GAAGTTGAAG CCACTGATTT TACCAATATT GCCGTCATTG TGGTGACTAT GGAAGATTTG
CCCAAGGCGC ATGCTGAAAT TGAAGATTTG GGCTTTAGCA TTCCTATCTT TGTGGCCATC
AAGTATGGCG ATAGCGTTCC TGATGAATGG CTGCCTCACG TATACGGCGT GCTAGAGCTG
GCTGATGATC AAAAATACTA TAACGGCCAG TTGGTCAATG CCGCAGCAGC GCACTATATA
GACACCCTAG ATCCTCCGTT TTTCCAAGCG CTACGTGAGT ATACCGATTA TGGCAATGCC
GCCTTTGATT GCCCGGGTCA TCAAGGTGGT CAGTTTTTTC GCCGCCATCC CTCAGGTCGC
CGCTTCTTTT TATACTTCGG TGAGACCCTA TTTCGTGCTG ACTCCTGTAA TGCGGATGTG
GGCTTAGGCG ATTTATTGAT TCATGAAGGC CCTGCTTTTC AAGCGCAGGC CCATGCCGCC
AAAGTGTTTA ACGCCGACAA AACCTATTTT GTATTAAACG GTACGTCTTC TTCGAACAAA
ATCGCCATTG GTGCCCTTGT GGCGCATAAT GATCTGGTAC TCTTTGATCG CAATAACCAC
AAGTCTGTGT ATCAAAGTGC ACTGTCTATG AGTGGCGGTA CGGCGGTATA CCTTGAGACT
GACCGTAATG CATACGGCCT TATAGGGGGC ATTGCCTCAC ACTGCTTTGA TGAGGCGGAG
ATTCGTGAGC GCATTCGTGA GGTATCTCCA GAGCGTGCCG ATGCAAAGCG CCCTTTTCGT
CTGGCCGTGA TCCAGCTGGG TACCTATGAC GGTACCATTT ATAATGCTCG CCAAGTGGTG
GATAAGATTG GTCATTTATG TGACTACATC TTGTTCGATA GCGCTTGGGT TGGCTATGAG
CAGTTTATCC CTATGATGCA AGATTGCTCA CCGCTATTAT TAGAGCTGAC GCCAGATGAC
CCGGGTATTA TTGTGACTCA GTCAGTGCAC AAGCAGCAAG CCGGCTTCTC ACAAGCCTCA
CAGATTCACA AAAAAGACAA TCACATCAGT GGGCAGGCGC GTTATGTCAA CCACAAACGT
TTTAACAATG CGTTTATGAT GCATGTGTCG ACCAGCCCTT TTTATCCGCT GTTTGCCTCT
TTGGATGTTA ACGCTAAGAT GCACGAGGGC AAAGCGGGTC AGCGTATGTG GCATGAGTGT
GTCATTGGGG GGATTGAAGC GCGCAAAATG CTGCTCGATA CCTGCACTTT AATTAAGCCG
TTTGTGCCGC CAACCATTGA TGGCAAGCTG TGGCAAGATT ACGATACTGA GCAAATTGCC
AATGACATTC GCTTCTTTGA ATTTAAAGAA GGTGAGCGCT GGCATGACTT CGAGCAATAT
GCTGACAAGC AGTACTTTAT TGACCCTTGT AAGCTGCTAT TGACCACCCC TGGCATCAAT
ATGGATACAG GTGAATATGA AGCAACTGGC GTGCCCGCCC CGCTGCTGGC GCATTATCTG
CGTGAAAGCT CGGTCATTCC AGAAAAAGCG GATTTAAACT CCATTCTTTT TTTGCTAACC
CCTGCCGAGA CGCTGGCCAA GTTCCAGCAT CTGGTGGCGC GTATTGTACG CTTTGAGGCG
CACATTAAGT CTAACAGTCC GGTGAGCGAG GTGCTGCCCT CACTGGCCAA AGCTTACCCA
CAATATCGAA GCTTAGGTAT CAATGAGCTG TGTCAGCGTC TGCATGATTT TTATGCCAAG
CACAAGCTGA ACCAGTTACA GCAGCAAATG TTTAAGCGTG AGCACCGTCC TAAGTTTGCG
ATGCGTGCTT TTGATGCGCA CAATGCCTTT ATTCGCAATG ACATTGAGCT GGTGCCTTTG
GCGCATATTG AAGGCCGTAT TGCGATGGAA GGTGCCCTGC CTTATCCGCC TGGCGTCTAT
TGTATCGTGC CTGGTGAAGT TTGGGGCGGC GCAGTGCTGG ATTATTTCTT AGCATTAGAA
GAAGGGGTTA ATTCCTTGCC AGGCTTTGAG CCGGAGGTTC AAGGCGTGTA CTGGGAGTAT
AATGAAGAAG GCCGCAAGCA GGCATGGGCT TATGTGCTAA AAGATGACTC TATCCCTGCC
GAGCCGCTAC CTTACAAAGC GTCTAGCGAG ATTGAGCCTT ATCACGACTC AGCCTCTTTT
GAAGACAAAC AAGAGGCGTT GACGCCTTTT GGTCATATTT AG
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| Protein sequence | MKIAVSDGIE YALNCNYRLT EVEATDFTNI AVIVVTMEDL PKAHAEIEDL GFSIPIFVAI
KYGDSVPDEW LPHVYGVLEL ADDQKYYNGQ LVNAAAAHYI DTLDPPFFQA LREYTDYGNA
AFDCPGHQGG QFFRRHPSGR RFFLYFGETL FRADSCNADV GLGDLLIHEG PAFQAQAHAA
KVFNADKTYF VLNGTSSSNK IAIGALVAHN DLVLFDRNNH KSVYQSALSM SGGTAVYLET
DRNAYGLIGG IASHCFDEAE IRERIREVSP ERADAKRPFR LAVIQLGTYD GTIYNARQVV
DKIGHLCDYI LFDSAWVGYE QFIPMMQDCS PLLLELTPDD PGIIVTQSVH KQQAGFSQAS
QIHKKDNHIS GQARYVNHKR FNNAFMMHVS TSPFYPLFAS LDVNAKMHEG KAGQRMWHEC
VIGGIEARKM LLDTCTLIKP FVPPTIDGKL WQDYDTEQIA NDIRFFEFKE GERWHDFEQY
ADKQYFIDPC KLLLTTPGIN MDTGEYEATG VPAPLLAHYL RESSVIPEKA DLNSILFLLT
PAETLAKFQH LVARIVRFEA HIKSNSPVSE VLPSLAKAYP QYRSLGINEL CQRLHDFYAK
HKLNQLQQQM FKREHRPKFA MRAFDAHNAF IRNDIELVPL AHIEGRIAME GALPYPPGVY
CIVPGEVWGG AVLDYFLALE EGVNSLPGFE PEVQGVYWEY NEEGRKQAWA YVLKDDSIPA
EPLPYKASSE IEPYHDSASF EDKQEALTPF GHI
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