| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1151 |
|---|
| Symbol | |
|---|
| ID | 5206658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1408527 |
|---|
| End bp | 1409264 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640599371 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001280050 |
|---|
| Protein GI | 148652957 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCTT CGCTGCTAAA CGCACTACAA AGTCTGCTCG CCATGCTGCC ATTTATGTCA
CCAGCGCGGG CTGATATCGT TATCCAGTCG TTTTGGCCGA TGCTAAAAGG CGCCATTTAC
TATTCCATTC CGTTGGCCAT TGCCTCATTT ATTATTGGTA TGGCCATCGC CTTGGTGGTG
GCGCTGATTC GAGTGGTGCC ACGTCAGGCA CTTTGGCATA AGATTGCGTA TAGGCTGGCA
CGTATTTATG TGTCGGCCAT ACGTGGTACA CCAATGCTGG TGCAGCTTTT TATTATATTT
TATGGTCTGC CAAGCGTTGG GGTCATGCTT GAGCCTTTCC CAGCAGCAAT TATTGCCTTC
TCGCTCAATA TTGGTGCTTA TGCATCAGAG ACTGTACGTG CCTCTATCTT ATCTATTCCT
AAGGGGCAGT GGGAAGCGGG CGCTACCGTG GGTCTGACTT ATTTGCAAAG CTTTCGTCAT
GTCATCTTGC CGCAAGCACT GCGAGTGTCT GTACCCCCCT TGTCGAATAC CTTTATTAGC
CTTGTAAAAG ACACCTCTCT TGCCTCACTT ATCTTAGTCA CTGAGATGTT TAAGCAGGCT
CAAATTATTA CTGCGCGAAA CTATGAATTT ATGCTGGTCT ATACTGAGGC GGCTTTAATA
TATTGGGTCA TCTGTCTGGC TTTGAGCGCC GTGCAAGGTC GACTCGAGAC CCGTTTGGAT
CGCTATGTGG CCAAATAG
|
|---|
| Protein sequence | MISSLLNALQ SLLAMLPFMS PARADIVIQS FWPMLKGAIY YSIPLAIASF IIGMAIALVV
ALIRVVPRQA LWHKIAYRLA RIYVSAIRGT PMLVQLFIIF YGLPSVGVML EPFPAAIIAF
SLNIGAYASE TVRASILSIP KGQWEAGATV GLTYLQSFRH VILPQALRVS VPPLSNTFIS
LVKDTSLASL ILVTEMFKQA QIITARNYEF MLVYTEAALI YWVICLALSA VQGRLETRLD
RYVAK
|
|---|
| |