Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1146 |
Symbol | |
ID | 5206525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1401765 |
End bp | 1402616 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640599366 |
Product | putative glutathione S-transferase YghU |
Protein accession | YP_001280045 |
Protein GI | 148652952 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.137418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCAA ACAACACCTT AAATAACACC TTAAATAATG CCAATACAGA TTATGTGCCC CCTAAAGTGT GGCAGCCGGT AGAGGGTAAT GGCGGCAAGT TTGCCAATAC CAACAAGCCC ACAGCAGGCG CCCGTCATCA GCAAACTCTA CCCAAAGGCG ACAATCCCCT ACAGCTGTAT TCGCTGAACA CGCCCAATGG CATTAAGGTA AATATATTGT TAGAGGAGCT CGCTGAGCTT GGCATAGAGT CGGCTAAGTA TGATGCCTAT AAAATTGACA TTATGGAGAA TGATCAATTC GGCTCAGACT TCGTGGAGAT TAATCCAAAC TCTAAAATTC CTGCACTTAT CGATTACTCT GATGCCAGCA ATCCGGTCAA ATTGTTTGAA TCGGGCGCCA TCTTGATGTA TTTGGCAGAA AAATTTAATA AATTTAAGCC ACAAAACACA CAAACCCAAA AATACGCCAC CTATCTAAGC TGGGTGATGT GGCAAATGGG TAGCGCGCCT TATTTGGGCG GCGGTTTTGG TCATTTCTTT AGCTATGCGC CATATCCGAT GCAGTATCCC ATTGACAGAT TTACGATGGA GACCAAACGA CAATTAGATT TGCTAGATAA GCACTTAGCC CACCATGAAT ATATGATTGG CGATGGCGAG GACAACTATA GCGTGGCTGA TATGCTCATC TGGCCTTGGT ATGGCCGCTT GGCGTTGGAT GAGTCGTATG AGCGCGCTGG AGAATTCTTG CAAGTGGACA GCTACACCCA TCTACAGCGC TGGGCGAAGC AAATCTCTAC ACGTCCTGCG GTACAGCGTG CGGTCAACCT TGAGCTAAAG CCGATTAAAT AA
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Protein sequence | MSSNNTLNNT LNNANTDYVP PKVWQPVEGN GGKFANTNKP TAGARHQQTL PKGDNPLQLY SLNTPNGIKV NILLEELAEL GIESAKYDAY KIDIMENDQF GSDFVEINPN SKIPALIDYS DASNPVKLFE SGAILMYLAE KFNKFKPQNT QTQKYATYLS WVMWQMGSAP YLGGGFGHFF SYAPYPMQYP IDRFTMETKR QLDLLDKHLA HHEYMIGDGE DNYSVADMLI WPWYGRLALD ESYERAGEFL QVDSYTHLQR WAKQISTRPA VQRAVNLELK PIK
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