Gene PsycPRwf_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1142 
Symbol 
ID5206923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1397309 
End bp1397746 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content46% 
IMG OID640599362 
ProductMgtC/SapB transporter 
Protein accessionYP_001280041 
Protein GI148652948 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.143117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATT TAGATATTAA CTTCGGGTTG ATGGGCTACC ATTTATTAAA GCTTTTTATT 
GCTTTTTTAT TGTCATTGCC CATTGCTTTG AATCGCGAGA TGAAGGACAG TGGCGCAGGG
CTTAGGACGT TTCCGCTAGT CACTATTGCC TCATGTGCCT TTATGCTAGT AGGCATGGAT
ATTTATAAAG GCGATGCCGA GGCGCGTATT ATGTATGCGA TTATCACGGG CATGGGGTTT
ATCGGTGGTG GTGCAATATT TAAGACAGAA GATGGGGCGA GGGGGACGGC AACCGCGGCA
AGTTTATGGA ACACGGCCGC TATTGGCATC TCTGTGGCTA CGGGCCGATA CGAAATTGCC
ATTATTTTAT CTGTTGTGGG CTTCGTTATC TTGCAGTTCT CCGAACCCTT TAAAGTAAAG
GACAACAGGC TACCTTAA
 
Protein sequence
MLDLDINFGL MGYHLLKLFI AFLLSLPIAL NREMKDSGAG LRTFPLVTIA SCAFMLVGMD 
IYKGDAEARI MYAIITGMGF IGGGAIFKTE DGARGTATAA SLWNTAAIGI SVATGRYEIA
IILSVVGFVI LQFSEPFKVK DNRLP