| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1105 |
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| Symbol | |
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| ID | 5206105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1355315 |
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| End bp | 1356799 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599326 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001280005 |
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| Protein GI | 148652912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACACT TATCACCGCC GCCTGGCTCG TTATCACAAC AAGCCTACCG TGAGGATCCA
GATAGCCGCC AAGTACGCCG AGTGCTGTGG ACCTTGCTAT TGGGCGGCAC AGTGGTCAGC
TTTAGCAACA GTGCGTTAAA CCCGGCCATC CCTGTTTTTA TGTCCATATT TTCAGTAGAT
ATTGTGACAG GAAGCTGGCT GTTAAATGGC TATGTACTGG CAATGAGTGT GGGTCTGATG
CTCAGTGGCT ATTTGAGCAA GGCCTTTTAT TTTAAGCAGG TATATATCTG CGCCATTACT
GGATTTATGA TGGGCTCAGT GCTGGGTATG TCAGCTACCA GCTTGTCATT GATTATTATA
GCAAGAGTCA TTCAAGGACT GGCAGGCGGC TTAATTATCC CCTTATCCAT CGGCCTGTTA
TATCAGGTGT ATCCCAGCGC TCAGCAAGGC CGAGCTATGG CGTTGTGGGG GATAGTCATT
ATGATGTCTT TGGCTTTTGG CCCCTTAGTT GGGGCTTTTT TAGTGGCACA TTTTGCATGG
TGGACTTTAT TTGCCATAAC CTTACCGCTT AGCGCCTTGG TGGTGGCCAT GGCAATGAAG
TGGCTGCCCT GGCTACCTGA GCACCAAGCA CCAAAAACCC GCCACAAGCC GTTTGATAAA
AAGGGCTTTA TGGGATTGCT GCTTTGGCTA CTGGCACTAA GCTTATGGCT CAATACCTTA
AAGTCAGATT CTGCGATGCA AAGCAATGGC TTGATTCAAT TGGTGCTGCT GGCCGGCTTT
GTGATCACGG CTATCATCTG GTGGCGCTAT GAGCAACGAC AGTCAAACCC GCTACTCAAT
GTCAATTTGT TTGCCAATAA AACTTACTTG CACAGCACAA TATTAAGTAT CACCCAGACA
ATTGGTCTAA TGATGGGCCT GCTATTTTTG CCTATTATCA TTCAGCAAAT AATGCACAAA
AGCGCGATGT GGACAGGCTT GGTGTTAATG TTTGCCACCT TGATTGCCAG TGTGACCACT
CATATTGCTG GCGGTATTGT TGATAAATAT GGCGCTAGGG ATATTGGCAG TGCAGGGGTG
GTTATCAGTG CGGCCTCTAT GCTGATGCTA GCTTGGGGCT TAGCGACGCC TAATATCTGG
CTAATGATGC TGGTCATGGG CGTCCAGGGA GTGGGAACAG GATTGGCCTA TTTACCCACC
ACAACTGTTG GGTTGAGTAG TCTGGATAAG CCTATGGTGA CCGAGGGCGC CGCCTTAAAT
AATATCAGTC GCCGTATTGT CTCTACCCTG TTTATTGCGC TCGCAACCTT ATATATCAAT
GGTGAAGGAC TGGGGATATT GATAAAGCTC ATGCCAAGCT TATCAGAAGC TCACGCGCTA
GTAGCACCGA TGCAAGAGGT GTTTGTGGGA CTGGCGATGC TATTGTTGAT GACGCTTATT
TCTGCCAGAC AGCTGCCATC TGGGTTATCA GATAATTCAG AGTAG
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| Protein sequence | MTHLSPPPGS LSQQAYREDP DSRQVRRVLW TLLLGGTVVS FSNSALNPAI PVFMSIFSVD
IVTGSWLLNG YVLAMSVGLM LSGYLSKAFY FKQVYICAIT GFMMGSVLGM SATSLSLIII
ARVIQGLAGG LIIPLSIGLL YQVYPSAQQG RAMALWGIVI MMSLAFGPLV GAFLVAHFAW
WTLFAITLPL SALVVAMAMK WLPWLPEHQA PKTRHKPFDK KGFMGLLLWL LALSLWLNTL
KSDSAMQSNG LIQLVLLAGF VITAIIWWRY EQRQSNPLLN VNLFANKTYL HSTILSITQT
IGLMMGLLFL PIIIQQIMHK SAMWTGLVLM FATLIASVTT HIAGGIVDKY GARDIGSAGV
VISAASMLML AWGLATPNIW LMMLVMGVQG VGTGLAYLPT TTVGLSSLDK PMVTEGAALN
NISRRIVSTL FIALATLYIN GEGLGILIKL MPSLSEAHAL VAPMQEVFVG LAMLLLMTLI
SARQLPSGLS DNSE
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