| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1104 |
|---|
| Symbol | |
|---|
| ID | 5206104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1353210 |
|---|
| End bp | 1355294 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640599325 |
|---|
| Product | iron-hydroxamate transporter permease subunit |
|---|
| Protein accession | YP_001280004 |
|---|
| Protein GI | 148652911 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAATA GTAATCAGAA CAAAGACAAT AGCAATAGCC ATCTCCCTAA ACGCTCAACG
CAAGCGGCTA CAGACAGGCC AGTTGCAGTC TCCTCCTTGG CTTCGGCAGT AGAGGTCAAA
CACTGGCGGG CATGGGTCTT GATACTGATA CTGTTAGCGG CTATTGCCAT CAGCAGTTCG
GTATTGATTG ACAGGCTTTG GGAGCTACCA GTTAGCCAGC TGTTTAAGTC AAGCTTTACA
CTTGATGTGG CGGATATGGC GGTGCAGTTA AAGCTGGTCG CTACCAGCGT GGTGGCCTTA
TTGGCTGGAG GGCTACTGGG GGTGGTCAGT GTGTTATTAC AACAACTGGT CAAAAACCCT
TTGGCCTCTG ATACCACCTT GGCCATTGGC ACTGGCGCTC AATTGGCGCT GCTTATTGCG
ACCTTATTTG TGCCAAGTTT AGCCATTTAT GGTGGGGTAT GGATTGCCTT TGTCGGGGCG
CTGTTTAGTT TGGTATTGGT ATTTAGCTTA TCAGCGCCCA GCCGTTTTAA TCCACTAATC
TTAGTGTTAG CCGGACTGGT GGTAAATATT TTACTGGCTT CATTTGCCAG CACTTTGGTG
TTGTTTTTTA CTGAGCATAG CGTCGGTATT TTGTCATGGG CGGCTGGGTT TTTAACGCAA
AATAATTGGC ATACCACGGT TAAGCTTGCC GTAACGGCCA TAGCACTGGC GGCGATAAGT
ATCCCCTTAT TAAAGCCGTT AACCCTAATG AGCCTAGATG ATATGCAAGC CAAACGGCTG
GGCGTACCTA TTAATGCCTT ACGTTTAGCG GTCATTGCTA TCGTGGCTAT CGTATCGGCG
CTGGTGGTCA GTGAGGTGGG CTTGATTGGG TTTATCGGCT TGGCGGCAGC AAGTTTGGTG
AATGCCTTGG GTATTGGCTC TATCGGGCGC AGATTGGTAG CGGCCTTTGG CTTTGGCGCT
TTATTGCTGT GGTTGACCAG TAATGTGGCG CTGCTATTAG AGCCGGTGAT GGGGACGCCG
ATACCGGCAG GCTCTATCAC TGGCGTGTTG GGTGCCCCGC TGATTATTTG GCTGATTTTA
CGTCAAAGAC GCCAAGGCGT GACGCCCATT ACGCCGATGT TCACGCCCCA GCGTAAAGCC
ATCAACTGGT GGCGGTGGAG CGTGGGCGTA CTGCTACTTA TTGCTTTAGT TAGTGTATGG
GTCAAAGACC TCTCAGGCAT TGCCTTTAGT ACAGATTGGG CGCTAACCCA GCAATACCGA
TTGCCGCGCA CGCTAAGTGC TGCTGCTACC GGTGTCATGC TGGCTACCGC CGGGGTGTTG
CTACAGACCT TGACTCGCAA CCCCATGGCC AGCCCGGAAG TACTGGGCAT TAGCTCTGGG
GCTGCATTGG GAGTCATTGG TGGCTTTTTA TTGTTGCCCG CTTTTGGGAT AAAAGCTGGT
GCCCTAAGCT TGGTTGGCTC AGGGCTGGCA GGGGCGTTTT TGGTGCTATT ACTGATTATT
TGGTTGGCGC GTAAAGTCAC GCCAGCTTAC TTACTGCTGG TCGGTATCGG GATTGCCGCT
ATGATGGATG GCATCATGAG TATGGTCAAG CTGTCAGGTG ACCCAAGACT TGAGGCCATG
CTGAGCTGGC TATCGGGCAC CACGTATAGC GCCAGCCCTG AGACGGTCTG GTACCTGATG
ATAGCAGCAG CGGGACTGGT GGCACTTAGT ATGTTATTGA TTAAGCCGCT AAGGGTGCTG
GGATTAGGTG AGTCGGTGGC CAAAAGCTTG GGCGTTAAGG TGAGATTTTA TCAATTGGCG
CTACTGATCG TGGTGGCAGC CCTGAGTACA GTCAGCACAT TGGCGGTGGG TCCGCTCAGC
TTTATTGGGC TGATGGTGCC GCATTTGGCC ACTTCTTTAG GGGCAGTGCA GCTTGAGAAG
CAGCTGCCAT TAGCAGCACT TCTGGGCGCG GGGGTGATGG TCTTAGCGGA TTGGATTGGC
CGCTATATCA TCTTCCCTTA TGAGCTGCCG GCAGGCACCA TAGCCGCTAT CATTGGGGGA
CTGTACTTTA TATGGCTCAT TCGGCGCAGT TCGGTTCATC AGTAA
|
|---|
| Protein sequence | MPNSNQNKDN SNSHLPKRST QAATDRPVAV SSLASAVEVK HWRAWVLILI LLAAIAISSS
VLIDRLWELP VSQLFKSSFT LDVADMAVQL KLVATSVVAL LAGGLLGVVS VLLQQLVKNP
LASDTTLAIG TGAQLALLIA TLFVPSLAIY GGVWIAFVGA LFSLVLVFSL SAPSRFNPLI
LVLAGLVVNI LLASFASTLV LFFTEHSVGI LSWAAGFLTQ NNWHTTVKLA VTAIALAAIS
IPLLKPLTLM SLDDMQAKRL GVPINALRLA VIAIVAIVSA LVVSEVGLIG FIGLAAASLV
NALGIGSIGR RLVAAFGFGA LLLWLTSNVA LLLEPVMGTP IPAGSITGVL GAPLIIWLIL
RQRRQGVTPI TPMFTPQRKA INWWRWSVGV LLLIALVSVW VKDLSGIAFS TDWALTQQYR
LPRTLSAAAT GVMLATAGVL LQTLTRNPMA SPEVLGISSG AALGVIGGFL LLPAFGIKAG
ALSLVGSGLA GAFLVLLLII WLARKVTPAY LLLVGIGIAA MMDGIMSMVK LSGDPRLEAM
LSWLSGTTYS ASPETVWYLM IAAAGLVALS MLLIKPLRVL GLGESVAKSL GVKVRFYQLA
LLIVVAALST VSTLAVGPLS FIGLMVPHLA TSLGAVQLEK QLPLAALLGA GVMVLADWIG
RYIIFPYELP AGTIAAIIGG LYFIWLIRRS SVHQ
|
|---|
| |