| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1078 |
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| Symbol | |
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| ID | 5204961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1300724 |
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| End bp | 1301830 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640599299 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001279978 |
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| Protein GI | 148652885 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.491952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC TCAAGCTACG CATCAAAGAC AAACATGCAA ACCAGCTAAA CAAACTAGCT
GGGAGTGTTA ACTATGCGTG GAACTATGTT AATGCGTTAA GCTTTGAGCA TTTAAGACGC
ACAGGTAAGT ACTTTTCGGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGAGAGTAT
TTAGGCTTGC ACTCGCAAAC TTTGCAAGCC ATCAACGAAA CTCATGCCAA ATCTCGTAAG
CAGTTTAAAA AAGCCAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGCAAAAGC
TTAGGTTGGA TACCTTTTAA AAAGTCTGCC ATAAAGTATC TACATACCAG ACAAACAGGT
AAAAAAGCAC TTAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCAAAA GCTTATCATA
GACGTATTTG ATAGCTATAA TCTAAGCCTA TATCAAATCA ATACGCTTGA GATAGTGCAA
GACAGCCGTA ATCGTTGGTA TGCCTGTATT ACCGTTAAAG ACCATCCTAA GCAAGCAAGT
GGTATGGTCA GCGTTGGTAT TGATTTAGGC TTAAAGCAGT CTGCTACCAC CTCAAATGGC
GACAAGCTAA CTATTAAGCA GACCCAAAAA TGGGCTAAAA AGCTTGCCAT TGCTCAACGT
GCTAAGAATA AAAAGCGTGT CAAAGCAATC CATGCCAAAA TTAAAAACTC AAGATTAGAC
TTAATTCACA AATTCACCAC CAAGCTAGTT CAAAATAATG CTTTAATTGT GGTTGGTGAT
ATTAAATCAC GCTCATTCAC TAATTCGATG ACCAACCTAG CTAAATCGAC ATACGATGCA
GGATGGTTTG AACTCAAAAG ACAACTGGAA TATAAATGCA AGTATGCAGG TTGTCAGCTT
GAGGTAGTGA ATGAGAGTTA CACTACCCAA ACCTGTTCGC ACTGCCTTAA AATAAGTGAT
AGTAGTCCAA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC
ACATGGCATG ATAGAGATAT CAATGCTGCC AAGAACATCC TTGCGGTCGG GCTTGACCGT
CTAGTTGTAG GAATCCCCTC GGTTTAG
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| Protein sequence | MKTLKLRIKD KHANQLNKLA GSVNYAWNYV NALSFEHLRR TGKYFSAYDL SQYTKGSGEY
LGLHSQTLQA INETHAKSRK QFKKAKLNWR TNRPDAKRKS LGWIPFKKSA IKYLHTRQTG
KKALKSTIQL SLCKGQKLII DVFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKDHPKQAS
GMVSVGIDLG LKQSATTSNG DKLTIKQTQK WAKKLAIAQR AKNKKRVKAI HAKIKNSRLD
LIHKFTTKLV QNNALIVVGD IKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKYAGCQL
EVVNESYTTQ TCSHCLKISD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR
LVVGIPSV
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