| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1076 |
|---|
| Symbol | |
|---|
| ID | 5204959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1298791 |
|---|
| End bp | 1300050 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640599297 |
|---|
| Product | Zn-dependent hydrolase of the beta-lactamase fold-like protein |
|---|
| Protein accession | YP_001279976 |
|---|
| Protein GI | 148652883 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTATACA GTGCTCTGCT TATCCTAAAA TGGTTATTTA TCCTGATGTT AGCCATCGTT
GTTTTAATAG GCTTATTTTT GCAATTTGCC CCGACATTTG GCGGCAAACC AAGCAGTGAT
ACAGCCAAGC GAATCGCCAA CTCACCCAAC TTTAATGGCA AGACCTTTGT TAACTTGCCG
GTATCAAGCG CCGTTATCGC TGGCAAGCTT AATGATATCG CACCTTATAT CGCTCAAAAA
CAGACACAAA ACGCTCAATC TGGTGGCTTA TTGTGGCAGT TTTTATTTCC TCCTAAGGGT
AAAAATCCAA GCTATCCCAT AGAGACGGTG CCTCTAAATT TAAAGCAAAA AACAGCCAAA
GCGACAACCA AAGCGGTAAC CAATCCTCAC GTAGACACTA CATTAAAGGA CGGCGAGTTT
GTCTGGCTTG GGCACTCAAC TGTGTTGTTT CGTATCTTAG GTAAGCTGCT GATGACCGAC
CCAGTTTTTC ATCGTGCCTC TCCGCTGCCC ATTGGCGGCA AGCCCTTTAA GATGACACAC
CCGCCGCAGG CAAAGGATCT GCCCTTTATC GATGGCGTGC TTATCTCTCA TGACCACTAC
GATCACTTAG ACCATAAAGC CATTAAACAA CTGGCGCATA AAGTGGGGCA TTTTTATGTG
CCGCTTGGGG TAAAAGCGCA TCTGATACGC TGGGGGGTGG CGGCGGACAA TATCAGCGAA
TATGATTGGT ATGAGAGTGC CAACATCACT GGCGGCGCCT CTTTATCTAA GGATGAGATT
ACGCTCACCT TTGCGCCCAC TAGGCATTTT AGCGGACGCC GATTAACCGG ACAAAACACC
TCGCTATGGG GGAGCTGGGC GGTACAGTCT CAGCAGCTGA GCGTCTACTT TAGTGGCGAT
GGCGGCTACT CAGAAGAATT TGCCAAAATC GGTGAGCGCT TTGGCGGCTT TGATGTGGCC
TTTATCGAAG ATGGTGCTTA TAACCAGAGC TGGCGCAACG TTCATATGAT GCCAGAAGAG
TCGGCGCAAG CTGGCATCGA TGTTCAGGCA AAAGTCGTGC TGCCAATCCA TTGGGGCAAG
TTTGATTTGT CCGTGCATCA CTGGCGTGAA CCGGTTCGAC GACTCAAACT TGCCTTCGAT
AATTACAACA GCACTCAGCC TGCCAAACAC AGAATCAAAG TGGCCACCCC CCGTATCGGC
CAAGTCTTCA CCCTCGACAC ACTACCCACC GCGCCTTGGT GGGAGCACAA AGCCTCATAG
|
|---|
| Protein sequence | MLYSALLILK WLFILMLAIV VLIGLFLQFA PTFGGKPSSD TAKRIANSPN FNGKTFVNLP
VSSAVIAGKL NDIAPYIAQK QTQNAQSGGL LWQFLFPPKG KNPSYPIETV PLNLKQKTAK
ATTKAVTNPH VDTTLKDGEF VWLGHSTVLF RILGKLLMTD PVFHRASPLP IGGKPFKMTH
PPQAKDLPFI DGVLISHDHY DHLDHKAIKQ LAHKVGHFYV PLGVKAHLIR WGVAADNISE
YDWYESANIT GGASLSKDEI TLTFAPTRHF SGRRLTGQNT SLWGSWAVQS QQLSVYFSGD
GGYSEEFAKI GERFGGFDVA FIEDGAYNQS WRNVHMMPEE SAQAGIDVQA KVVLPIHWGK
FDLSVHHWRE PVRRLKLAFD NYNSTQPAKH RIKVATPRIG QVFTLDTLPT APWWEHKAS
|
|---|
| |