| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1070 |
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| Symbol | |
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| ID | 5205243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1290087 |
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| End bp | 1291193 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640599291 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001279970 |
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| Protein GI | 148652877 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TCAAGCTACG CATCAAAGAC AAACATGCAA ACCAGCTAAA CAAACTAGCT
GGGAGTGTTA ACTATGCGTG GAACTATGTT AATGCGTTAA GCTTTGAGCA TTTAAGACGC
ACAGGTAAGT ACTTTTTGGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGTGAGTAT
TTAGGCTTAC ACTCGCAAAC TTTGCAAGCC ATTAACGAAA CTCATGCCAA ATCTCGTAAG
CAGTTTAAAA AAGCCAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGTAAATCA
CTTGGCTGGA TACCCTTTAA AAAGTCTGCC ATAAAGTATC TACGTAGCAG ACAAACAGGA
AAGAAAGCAC TTAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCGAAA GGTAATCATA
GACGTATTCG ATAGCTATAA TCTATCTTTG TATCAAATCA ATACGCTTGA GATAGTGCAA
GACAGCCGTA ATCGTTGGTA TGCCTGTATT ACTGTTAAAG ACTTTCCTAA GCAAGTGAGT
GGTAAAGGTA GTGTTGGTAT TGACTTAGGC TTAAAGCAGT CTGCTACCAC ATCAACGGGC
GATAAACTAC AGATTAAGCA GACTCAAAAA TGGGCGAATA AATTAGCAGT CGCCCAGCGT
GCAAACAATA AAAGCCGGGC AAAGGCAATA CACGCCAAAA TTAAAAACTC AAGATTAGAT
GCCATACACA AATTCACCAC CCAATTAGTT AAGGATAATG CCTTAATTGT GGTTGGTGAT
GTTAAATCAC GCTCATTCAC TAATTCGATG ACCAACCTAG CTAAATCAAC ATACGATGCA
GGATGGTTTG AACTCAAAAG ACAACTGGAA TATAAATGCA AGTATGCAGG TTGTCAGCTT
GAGATGGTGA ATGAGAGTTA CACTACCCAA ACCTGTTCGC ACTGCCTTAA AATAAGTGAT
AGTAGTCCAA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC
ACATGGCATG ATAGAGATAT CAATGCTGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT
CTAGCTGTAG CAATCCCCTC GGTTTAG
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| Protein sequence | MKTLKLRIKD KHANQLNKLA GSVNYAWNYV NALSFEHLRR TGKYFLAYDL SQYTKGSGEY
LGLHSQTLQA INETHAKSRK QFKKAKLNWR TNRPDAKRKS LGWIPFKKSA IKYLRSRQTG
KKALKSTIQL SLCKGRKVII DVFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKDFPKQVS
GKGSVGIDLG LKQSATTSTG DKLQIKQTQK WANKLAVAQR ANNKSRAKAI HAKIKNSRLD
AIHKFTTQLV KDNALIVVGD VKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKYAGCQL
EMVNESYTTQ TCSHCLKISD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR
LAVAIPSV
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