Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1065 |
Symbol | |
ID | 5205238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1285338 |
End bp | 1285955 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640599286 |
Product | membrane protein-like protein |
Protein accession | YP_001279965 |
Protein GI | 148652872 |
COG category | [S] Function unknown |
COG ID | [COG4291] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0701762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGTG TGGTCCACCT AACATGGCAC GTCTCATTGA GTGCGGCACT GATTATCGGT TGGGATATCA CCGTGCTATC ATTTATTGCC AGCATTATTG TGATGATGAG ACATGATACC CTGCATAAGC ATTTAAGCAG TACTCGGCAA AGCACCTTTT TTATTTTATC TTTAATCACA GTCTCAAGCT TCATCTGTGT CTATGCCATC GCTCGGCAAA CTCAGTTGGC TGAGACTTAT AAAGATATCA CATTAGTACT GAGCTTGATT TTGACCATAG CCACTATTTT TATTGCCTGG TTGATGATTC AAGTGGTATT TGCGCTGCAG TATGCTTATT TGTATTTTTC TGAACAACAA AAAGGCCAAC GCTTGCCGCT GGCCTTTCCT GAAATGAGTT TGGATATAGA TAAAAGTACA CCCGGTACCA GCGAGCCACC TAAATATGTC GATTTTTTTT ACTGTGCTGT GGCAATAGGC ACCTCTGGGC AAACGGCAGA TGTTACGTTT ACTTCCCTTA GAGGCCGCAA ATTGGCCATA TTACACTCAA TTATTGCCTT TGCTTTTAAC CTTAGCATCA TTGCGTTACT GATTAATATC ATTGCCGCCT ATTTATAA
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Protein sequence | MGGVVHLTWH VSLSAALIIG WDITVLSFIA SIIVMMRHDT LHKHLSSTRQ STFFILSLIT VSSFICVYAI ARQTQLAETY KDITLVLSLI LTIATIFIAW LMIQVVFALQ YAYLYFSEQQ KGQRLPLAFP EMSLDIDKST PGTSEPPKYV DFFYCAVAIG TSGQTADVTF TSLRGRKLAI LHSIIAFAFN LSIIALLINI IAAYL
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