| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1064 |
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| Symbol | |
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| ID | 5205315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1284135 |
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| End bp | 1285259 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599285 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001279964 |
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| Protein GI | 148652871 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000691325 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATA ACAACTTATT CTCACGCCGA CGTTTTTTGG GAATGACAGG TGCAGGTTTG
GTTGGCTTAT CGGGACTGGG TCTAGCCGGC TGTCAGCGCT CTAATACCGA CACTGATACC
GCCGATTTGG CCAATACCGC GCGTGGTAAC GTGGTGAAGG TGTATAACTG GACCGAGTAC
ATTTCAGACA GTGTGCTAAA AGGCTTTACC CAAGAGACGG GCATCGAGGT CATTTATAGT
ACCTTTGACT CCAATGAGGC CATGTATGCT AAGCTAAAAC TGATGAATGG CAGCGGCGAT
TATGATGTGA TATTTCCAGG TACAGACTTT GTCGATAAGA TGCGCAAAGA GAGTATGCTT
GAGGTCATAG ATCATAATAA GCTCAGTAAT TTTGGTAATT TAAGTCCTAC TTTCTTAGAT
GCCTCGTTTG ACCCGCAAAA CAAATTTAGT GTGCCCTATC TGTGGGGCTC ATCTGGGATT
GCAGTCAATA AATCCCGTAT TGATATTAAC AGTATCACCT CTTGGAATGA CTTATGGCGT
CCTGAATTTG AGGGCCGGGT GATGCTAATG AATGATTTGC GTGATGTGTT TACCATGGGG
CTATTAACCT TAGGTTATCC CGCCACCACT CATGACCCTA AGCACATTGA AGCGGCATAC
CAAAAGCTGT CAAAGCTCAT GCCCAACGTG CGCACCTTTA ACTCAGATGC ACCGCGTATG
CCGTTTATGG AAGGGGAGAC GTATCTGGGG CTTGCCTGGA ATGGTGAGGT AATTATGGCG
CAAGATCAGG GCATGCCTGA GCTTGATTTT GTGTATCCCA AAGAAGGGGT GATTATGTGG
ATGGATAACA TGTCCATTCC CAAAAATGCC AAAAACCGCG AAAATGCCTA CGCCTTTATC
GACTATCTAC TGCGCCCAGA CAATGCCGCC ATTATTAGTG AAGAGATCGG TTACGGCTCA
CCTAATGAAA GCGCCAAGAA GCTGATGCCT GCAGATATTG CCAATAACCA AATTATCTAT
CCTCCCGATG ACTTACTTGG TCACGCTTTG TTCCGAGAAG ATGTTGGCGA TACCACCATG
GCCTTGTATC AAAAATACTG GGACCGACTC AAGGTCGATA TGTAG
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| Protein sequence | MANNNLFSRR RFLGMTGAGL VGLSGLGLAG CQRSNTDTDT ADLANTARGN VVKVYNWTEY
ISDSVLKGFT QETGIEVIYS TFDSNEAMYA KLKLMNGSGD YDVIFPGTDF VDKMRKESML
EVIDHNKLSN FGNLSPTFLD ASFDPQNKFS VPYLWGSSGI AVNKSRIDIN SITSWNDLWR
PEFEGRVMLM NDLRDVFTMG LLTLGYPATT HDPKHIEAAY QKLSKLMPNV RTFNSDAPRM
PFMEGETYLG LAWNGEVIMA QDQGMPELDF VYPKEGVIMW MDNMSIPKNA KNRENAYAFI
DYLLRPDNAA IISEEIGYGS PNESAKKLMP ADIANNQIIY PPDDLLGHAL FREDVGDTTM
ALYQKYWDRL KVDM
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