| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1061 |
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| Symbol | potA |
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| ID | 5205312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1281296 |
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| End bp | 1282444 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640599282 |
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| Product | putrescine/spermidine ABC transporter ATPase protein |
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| Protein accession | YP_001279961 |
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| Protein GI | 148652868 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000354755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTA ATGAAACTTC GGCACTGGCT TCAGCCAACG CCACCGAAAA AAAGTCGCTG
CTACAGATTC GTGGGCTAAA CAAAGCCTAT GATGATACTC AGATTCTAAA AAGTATCGAC
TTAGATATTT ATGATGGCGA GTTTTTAACT TTGCTGGGGC CTTCAGGCTG TGGTAAGACC
ACGCTACTGC GCCTCATAGG CGGCTTTGAA ATGCCGGATA CGGGCTCTAT GCAGTTAGAT
GGGGTCGATA TCACCCATCT ACCCGCTGAA AAACGCCCAA TTAATACCGT GTTTCAGCAG
TATGCACTAT TTCCGCATAT GAATGTGTAT GACAATATCG CGTATGGTTT GAAGCTTAAA
AAAGTGCCCA AAGCTGAGAT TGATACTCGG GTAAAAGAGG CGCTAAAAAT GGTACAGCTT
GAGCATACCA TAAATCGTCG CCCACAAGAC TTATCAGGGG GGCAGCAGCA GCGTATTGCA
ATTGCGCGTG CGGTGGTTAA CCGTCCTAAA ATGCTACTGC TTGATGAGCC TTTGTCTGCG
CTTGATGCTA AGATGCGGGT ACAGATGCAA TCTGAGCTTA AGCGCTTGCA GCGTGAGCTT
GGTATTACCT TCGTATTCGT AACTCACGAC CAAGAAGAAG CCTTATCGAT GTCTGATCGT
ATTGCGGTAA TGAAAGCTGG CGAGTTTCAA CAGATTGATT CACCCATTCG TATTTATGAA
ACCCCAGCTA ACTTATTTAC TGCCAACTTT ATCGGTGAGA CCAACTTATT TAAAGCCCGT
GTGCTAGAGG TGGCTGATAA ACACATAAAA GTAGAGGTCA CTGAGCAAAA AGAGGGCTTT
CATCCGATAC GTGAGCTGCC GCGTCCAAAA TTTGCGGTGC AAGTGGGACA AAGCATTAAC
CTATTGTTAC GCCCAGAGGA TATTCGCGTT TATTACCTCA ATGAAGGTCA TGAAGGTTTG
GTCGGGCACG TGATCGATAG TGCTTATAAA GGCAGTACCT TAGACTCTGT GATTCGTCTG
CAAAACGGCA ATGTGGTTAA GGCTTCTGAG TATTTCAACG AAGATGATCC CAATTTTAAC
TATAAATTGG GCCAAGAGGT GCGTGTAGAC TGGGTTGATG GCTGGGAGTG GATTTTACCT
GATGAATAA
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| Protein sequence | MSLNETSALA SANATEKKSL LQIRGLNKAY DDTQILKSID LDIYDGEFLT LLGPSGCGKT
TLLRLIGGFE MPDTGSMQLD GVDITHLPAE KRPINTVFQQ YALFPHMNVY DNIAYGLKLK
KVPKAEIDTR VKEALKMVQL EHTINRRPQD LSGGQQQRIA IARAVVNRPK MLLLDEPLSA
LDAKMRVQMQ SELKRLQREL GITFVFVTHD QEEALSMSDR IAVMKAGEFQ QIDSPIRIYE
TPANLFTANF IGETNLFKAR VLEVADKHIK VEVTEQKEGF HPIRELPRPK FAVQVGQSIN
LLLRPEDIRV YYLNEGHEGL VGHVIDSAYK GSTLDSVIRL QNGNVVKASE YFNEDDPNFN
YKLGQEVRVD WVDGWEWILP DE
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