Gene PsycPRwf_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1059 
Symbol 
ID5205310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1277900 
End bp1279639 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content46% 
IMG OID640599280 
Producttransposase IS66 
Protein accessionYP_001279959 
Protein GI148652866 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.591253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTG CCAATTTATC CGACTTATCA AAAGACCCCA TTTACGCCGA GCTTCTGGTG 
AAAATCCACC TGCTTGAACA GCGTAATGAG CACCTGCAGC AACAAATTGA TCAAACAAAT
ACAAGTCACG ATCAACTACA GCAGCTTTTT AACCAAGTGG TTGAGGAAAA CCACAAGCTG
TATGAACAAG TGCTTGAACT CATCGAAAAG CAAAAGCAGC TTATTCACCG GCTCTATGGA
CAAAAAAGCG AAGGCGTCAC TGCCAGACAA ACCCACTTAA ACTATGAGGC GGCGCAAGAA
GACTTAGCAG AGCTTGAACA AATCCGAGAT GACTACCGGA GTGGCTTAAG CAAAGAGGAG
CTTGCCAAGC TGCCTGCTAT CGATCGTACT CAGGCAGAAA CCCTCATTGA TGAGGATGAG
CTTGCTGACC AGCCGCCACC CTCAGTCACT CATCAGTCTA AAAAACCAAA GCGTGCCAAA
TACACGGTTA TTCCAGACAA CCTTGAGGTC AAAACCTTGG TTCATGAACC ACTCACCACC
GTTTGTGACT GCGGCTGTCA AATGATGCGA ATTGGGGAGG ATAAACAAGA CAAACTTGGC
ATTATCCCTA AGCAGTTTTA TATTGAGCGT CACCTCTATC CTAAATGGGT ATGCCGTGAG
TGTGACATCC TTCATCAAGC GGCTGCCCCC AAGCAGATTA TTAACAAAAG CATTGCCACC
CCAGAGCTGC TTGCGCACAT CCTTATTAGC AAGTATGCAG ACCATCAGCC CCTATATCGG
CAGAATATTA TCTATCAGCG AAGTGGGGTA AATATCCCCG ATGCCACCAT GGCAGATTGG
GTGGGACGCT GCGGCGTTGC CCTTGAGCCT TTAGTCAGTC GCTTGCACGC GCTATTACTG
TCTGAACCCA TCTTACATGC TGATGAAACG CCAGTATCTA TCATGAAGAA TCATGTAAAG
GTAGGTGGTA AATCATTAAA AAAAGGCTAT GTCTGGGCGT ATCTTACGCC ACAGCACAGC
TCCTTAAAGG CGGTGGTATA TGACTTTGCC GAAAGCCGTC GTAATGAGCA CCCTAAAGCC
TTTTTAGATA AGTGGCGCGG TAAGCTGGTT TGCGATGATT ACAGCGGGTA TAAGTTCTTA
TTTCATCAAG GTGTGACTGA AATCGGTTGT CTGGCCCATG CACGGCGTAA ATTTCATGAA
CTGCATATCA CTGGGCAAAG TATCGTGAGC ATTGAGGCAT TAACGTTATT TAGGCAGTTG
TATGCCATTG AACGTGAGAT TGATGAGCGA TTTGAAAAAC ACACACCCCC AATACCAAGA
GATCCCCAAA TAGTTCGGCA AATCAGGCAA GAAAAAGCCA AACCAATTGC CGATAAGCTG
CACCAATGGC TACAAGAAAA AAGACAGTTA ACCACTAAAA ATGCCAGTAT TAGTAAGGCG
ATGGATTATT GCCTAAAACG TTGGCAGGCG CTGACTCAGT ATCTAGATGA TGGCAGGCTG
CCGATTGATA ATAATTGGGC GGAGAATCAG ATGCGTCCGT GGGCACTTGG GCGTAAAAAC
TGGTTGTTTG CTGGTTCGCT ACGAAGTGGG CAGCGTGCTG CGAATATTAT GTCAATCATT
CAGTCAGCTC GCTTAAATGG CTTGGATGTG TCTGCTTATT TGACAGATGT GCTAAGACGC
TTGCCTACTC AAGAGGATCT GGATGAGTTG TTACCTCATC GCTGGGTGCC ACCGCAATAG
 
Protein sequence
MTAANLSDLS KDPIYAELLV KIHLLEQRNE HLQQQIDQTN TSHDQLQQLF NQVVEENHKL 
YEQVLELIEK QKQLIHRLYG QKSEGVTARQ THLNYEAAQE DLAELEQIRD DYRSGLSKEE
LAKLPAIDRT QAETLIDEDE LADQPPPSVT HQSKKPKRAK YTVIPDNLEV KTLVHEPLTT
VCDCGCQMMR IGEDKQDKLG IIPKQFYIER HLYPKWVCRE CDILHQAAAP KQIINKSIAT
PELLAHILIS KYADHQPLYR QNIIYQRSGV NIPDATMADW VGRCGVALEP LVSRLHALLL
SEPILHADET PVSIMKNHVK VGGKSLKKGY VWAYLTPQHS SLKAVVYDFA ESRRNEHPKA
FLDKWRGKLV CDDYSGYKFL FHQGVTEIGC LAHARRKFHE LHITGQSIVS IEALTLFRQL
YAIEREIDER FEKHTPPIPR DPQIVRQIRQ EKAKPIADKL HQWLQEKRQL TTKNASISKA
MDYCLKRWQA LTQYLDDGRL PIDNNWAENQ MRPWALGRKN WLFAGSLRSG QRAANIMSII
QSARLNGLDV SAYLTDVLRR LPTQEDLDEL LPHRWVPPQ