Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1059 |
Symbol | |
ID | 5205310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1277900 |
End bp | 1279639 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640599280 |
Product | transposase IS66 |
Protein accession | YP_001279959 |
Protein GI | 148652866 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.591253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTG CCAATTTATC CGACTTATCA AAAGACCCCA TTTACGCCGA GCTTCTGGTG AAAATCCACC TGCTTGAACA GCGTAATGAG CACCTGCAGC AACAAATTGA TCAAACAAAT ACAAGTCACG ATCAACTACA GCAGCTTTTT AACCAAGTGG TTGAGGAAAA CCACAAGCTG TATGAACAAG TGCTTGAACT CATCGAAAAG CAAAAGCAGC TTATTCACCG GCTCTATGGA CAAAAAAGCG AAGGCGTCAC TGCCAGACAA ACCCACTTAA ACTATGAGGC GGCGCAAGAA GACTTAGCAG AGCTTGAACA AATCCGAGAT GACTACCGGA GTGGCTTAAG CAAAGAGGAG CTTGCCAAGC TGCCTGCTAT CGATCGTACT CAGGCAGAAA CCCTCATTGA TGAGGATGAG CTTGCTGACC AGCCGCCACC CTCAGTCACT CATCAGTCTA AAAAACCAAA GCGTGCCAAA TACACGGTTA TTCCAGACAA CCTTGAGGTC AAAACCTTGG TTCATGAACC ACTCACCACC GTTTGTGACT GCGGCTGTCA AATGATGCGA ATTGGGGAGG ATAAACAAGA CAAACTTGGC ATTATCCCTA AGCAGTTTTA TATTGAGCGT CACCTCTATC CTAAATGGGT ATGCCGTGAG TGTGACATCC TTCATCAAGC GGCTGCCCCC AAGCAGATTA TTAACAAAAG CATTGCCACC CCAGAGCTGC TTGCGCACAT CCTTATTAGC AAGTATGCAG ACCATCAGCC CCTATATCGG CAGAATATTA TCTATCAGCG AAGTGGGGTA AATATCCCCG ATGCCACCAT GGCAGATTGG GTGGGACGCT GCGGCGTTGC CCTTGAGCCT TTAGTCAGTC GCTTGCACGC GCTATTACTG TCTGAACCCA TCTTACATGC TGATGAAACG CCAGTATCTA TCATGAAGAA TCATGTAAAG GTAGGTGGTA AATCATTAAA AAAAGGCTAT GTCTGGGCGT ATCTTACGCC ACAGCACAGC TCCTTAAAGG CGGTGGTATA TGACTTTGCC GAAAGCCGTC GTAATGAGCA CCCTAAAGCC TTTTTAGATA AGTGGCGCGG TAAGCTGGTT TGCGATGATT ACAGCGGGTA TAAGTTCTTA TTTCATCAAG GTGTGACTGA AATCGGTTGT CTGGCCCATG CACGGCGTAA ATTTCATGAA CTGCATATCA CTGGGCAAAG TATCGTGAGC ATTGAGGCAT TAACGTTATT TAGGCAGTTG TATGCCATTG AACGTGAGAT TGATGAGCGA TTTGAAAAAC ACACACCCCC AATACCAAGA GATCCCCAAA TAGTTCGGCA AATCAGGCAA GAAAAAGCCA AACCAATTGC CGATAAGCTG CACCAATGGC TACAAGAAAA AAGACAGTTA ACCACTAAAA ATGCCAGTAT TAGTAAGGCG ATGGATTATT GCCTAAAACG TTGGCAGGCG CTGACTCAGT ATCTAGATGA TGGCAGGCTG CCGATTGATA ATAATTGGGC GGAGAATCAG ATGCGTCCGT GGGCACTTGG GCGTAAAAAC TGGTTGTTTG CTGGTTCGCT ACGAAGTGGG CAGCGTGCTG CGAATATTAT GTCAATCATT CAGTCAGCTC GCTTAAATGG CTTGGATGTG TCTGCTTATT TGACAGATGT GCTAAGACGC TTGCCTACTC AAGAGGATCT GGATGAGTTG TTACCTCATC GCTGGGTGCC ACCGCAATAG
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Protein sequence | MTAANLSDLS KDPIYAELLV KIHLLEQRNE HLQQQIDQTN TSHDQLQQLF NQVVEENHKL YEQVLELIEK QKQLIHRLYG QKSEGVTARQ THLNYEAAQE DLAELEQIRD DYRSGLSKEE LAKLPAIDRT QAETLIDEDE LADQPPPSVT HQSKKPKRAK YTVIPDNLEV KTLVHEPLTT VCDCGCQMMR IGEDKQDKLG IIPKQFYIER HLYPKWVCRE CDILHQAAAP KQIINKSIAT PELLAHILIS KYADHQPLYR QNIIYQRSGV NIPDATMADW VGRCGVALEP LVSRLHALLL SEPILHADET PVSIMKNHVK VGGKSLKKGY VWAYLTPQHS SLKAVVYDFA ESRRNEHPKA FLDKWRGKLV CDDYSGYKFL FHQGVTEIGC LAHARRKFHE LHITGQSIVS IEALTLFRQL YAIEREIDER FEKHTPPIPR DPQIVRQIRQ EKAKPIADKL HQWLQEKRQL TTKNASISKA MDYCLKRWQA LTQYLDDGRL PIDNNWAENQ MRPWALGRKN WLFAGSLRSG QRAANIMSII QSARLNGLDV SAYLTDVLRR LPTQEDLDEL LPHRWVPPQ
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