Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1055 |
Symbol | |
ID | 5205448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1275674 |
End bp | 1276432 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640599276 |
Product | integrase catalytic subunit |
Protein accession | YP_001279955 |
Protein GI | 148652862 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGT TCAAATTGGG TGATAAATAC AGTACTGTTA AGCAACAGAT TGCAGAGATT TATCATAAAC ATAAAGGCAG ATATGGGTAT CGCAGGATAA CATGGGTCTT GAAAAATCAA GGTGTTCTAA TCAACCATAA ATGCGTGTAT CGTCTCATGC AAGAAATAGG ACTAAAATCA GTTGTTCGAC CTGTAAAATA TAAATCCTAT AAAGGAACAG TTGGTAGAAT TGCAGATAAT GTGTTGAATC GAGAATTTGA AGCTAACCAG CCAAATAAAA AGTGGGTTAC AGATGTTACT GAATTTAAGG TCAAAGATGA AAAGCTTTAT TTATCGCCTA TGATGGATTT ATTCAATGGC GAAATTATTG CCTATCAACT CAAACGCAGA CCAACGTTTA ATTTAGTTGA ATCTATGCTA ATAGAAGCCA TGGATACGCT TAAGCCTGAT GAAAAACCTG TCGTACATTC TGACCAAGGT TGGCAATATC AAATGAAACG TTATCAAAAG CACCTAACGA ATCAAGGTTT AACTCCAAGT ATGTCTAGAC GGGGCAATTG TCTAGATAAT GCTTGTATAG AAAGTTTTTT CGGCGTTCTT AAATCGGAAT GTTTTTATCG ACATGAATTT GTCTCAATTG AGGAGTTGGA AGAAACTGTG AGAGAGTACA TCTACTATTA CAATAATAAC CGAATTAAAG TGAAATTAAA TGGTTTGTCG CCTGTGCAAT TTAGGAGGAA ATATTTAGAA GCTGCCTAA
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Protein sequence | MKRFKLGDKY STVKQQIAEI YHKHKGRYGY RRITWVLKNQ GVLINHKCVY RLMQEIGLKS VVRPVKYKSY KGTVGRIADN VLNREFEANQ PNKKWVTDVT EFKVKDEKLY LSPMMDLFNG EIIAYQLKRR PTFNLVESML IEAMDTLKPD EKPVVHSDQG WQYQMKRYQK HLTNQGLTPS MSRRGNCLDN ACIESFFGVL KSECFYRHEF VSIEELEETV REYIYYYNNN RIKVKLNGLS PVQFRRKYLE AA
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