| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1054 |
|---|
| Symbol | |
|---|
| ID | 5205447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1273804 |
|---|
| End bp | 1275387 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640599275 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001279954 |
|---|
| Protein GI | 148652861 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTA CCAAATGTTT TTCTCCGTTG TTGACAGCAG AGGTCAGTGG AAGACAGGAT
GCTTTTACAG CTATTTATTT AGGTGAAGGT AATGATCAAT ATATAGTTGG CAATGGCTTA
TTGTATGGAT TTAGTTTCGG AGAGTCAGGT GATGACTTAT TTGATATTCA ACAAGCAATA
AGTGGATCTT ATAATTTATA TGCTGGATCT GGTAGTGATA CTGTTAATGC TGGCAGTATT
GCAGGTCTTG TAGACTTAGG TAGTGGGAAT CCCATGCCTT CTGAATATTT AGCAACTTAT
AACAACAGTA CTTTAAGTCT AGGAAATGAT AATAATGTAG ATTTAGCAAG TGATATTAAT
ACTGTAAATG TGACTGGAAG TATAAGCGGC GGTACGATAT TGGGTGGTGC TGGTATTGAT
AAAATTTACG TTACAAATGG TTATGTCGAT AGTGGGGCCA CTATTAATCT TGGTGCAAAT
AATGACTCAT TAACAGCAAT GGGTCTTAAT AATAGCTCTA CAGTTGACAT GGGTGATGGT
GACGATGTAG TAACTATCAA AACTGATATA GGAAATGGTA CAGGCACGCC AACTTTAGGT
CTTGGTTCTG GTAATGATAC GTTAACTGTG GGTAATAGTG CTTCAAATGA TGGTAGATTG
TTATCGGGCA ACATTGATAT GGGTACAGGT TATGATAAAG CCTATATAAA TGGAACTATA
AGTGGCGGTA CCTTAAATAT GGGAAGTGGC GGAAGTATAG TTCAAATCCG TACACTAACG
GGTGGTAGTG TTACGTCAAC AGATGGTGTT GATGATATCA AGGTGACGGG CGCAATGTCT
GGAGGTAGCA TCAGTACCGG TAATGATAAT GACAAAGTCA TTATTGAAGG TATTATGAAG
GGTGATTCAA GTATTAATAC CGGTTCAGGA AATGACACTG TTGAAGTCAC CCAGTCTGTA
GAAAAAAGTG GTATATACAG TCCAAGTCTA GACTTAGGCA CAGGAGACGA TTCATTTAAG
TCTTCGCAAT TTAAGAGTGG TACCCTAAGT ATGGGTGATG GTATTGATAT TGTTGATATA
ACCGACACTA GTAGTGGGAT GAGTGGCGGT ACTATTGATC TAGGTGCAGG TAATGACACT
ATTAATTTAG CTAATATGAC TGGTGGCACA ATCAATGGTG GCGTCGGAAA TGATAATATT
AATATTGTTA AATACACTGG TGGCACCATA AATGGTGGTG ATGGTATAGA TACAGTTCAT
ATTACTGGTA GTGGTAGTTC TCTTACTACG AGCAGTATAT CAGCAGTTGA AGTATTAGAT
TTAGGAACTG GTGATATGGG TAATACTTTT AGTGCAAGTT TTAACCAAAT CCGTACTAGC
TCGCTTTCAG GATTATTTAT TGCAGGTGAT GCAAAGGATA CCGTCAATTT AAGTGGTGCA
GGCAATTGGA CGAAATCTTC TACTATTACT ACTGGTGATG ATGGTAATAC TTACTATGCG
TATACTGGCA AGTATTTATC ATATTCTGAT CAGGTTATTT ATATTGACAC TGATATTGCA
GCTGCAGATA AGGTTATTTT GTAA
|
|---|
| Protein sequence | MKSTKCFSPL LTAEVSGRQD AFTAIYLGEG NDQYIVGNGL LYGFSFGESG DDLFDIQQAI
SGSYNLYAGS GSDTVNAGSI AGLVDLGSGN PMPSEYLATY NNSTLSLGND NNVDLASDIN
TVNVTGSISG GTILGGAGID KIYVTNGYVD SGATINLGAN NDSLTAMGLN NSSTVDMGDG
DDVVTIKTDI GNGTGTPTLG LGSGNDTLTV GNSASNDGRL LSGNIDMGTG YDKAYINGTI
SGGTLNMGSG GSIVQIRTLT GGSVTSTDGV DDIKVTGAMS GGSISTGNDN DKVIIEGIMK
GDSSINTGSG NDTVEVTQSV EKSGIYSPSL DLGTGDDSFK SSQFKSGTLS MGDGIDIVDI
TDTSSGMSGG TIDLGAGNDT INLANMTGGT INGGVGNDNI NIVKYTGGTI NGGDGIDTVH
ITGSGSSLTT SSISAVEVLD LGTGDMGNTF SASFNQIRTS SLSGLFIAGD AKDTVNLSGA
GNWTKSSTIT TGDDGNTYYA YTGKYLSYSD QVIYIDTDIA AADKVIL
|
|---|
| |