Gene PsycPRwf_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1049 
Symbol 
ID5204745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1257384 
End bp1258241 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content42% 
IMG OID640599270 
ProductOuter membrane protein and related peptidoglycan-associated (lipo)protein-like protein 
Protein accessionYP_001279949 
Protein GI148652856 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.547812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTTA AAACCCTACT AATACCAAGT GTATTAATCA CAATGTTAGC AACAGGCTGC 
CAATCTACAG CTTTTATGGC TTCAGCGGAT AACCCTATAG GAAGTATAGC AAGTACACCT
GTGTCAACGA CGGATGGCGT TCGTCAAGTC GACACGGCTC GCTGGACTAA AACGGGTCAA
GTATTTACGA CTCCTGATGA TAGTGCATTA GCCGCTAATG AGAGTCGTAT TGTTATATTT
CGCACGCCTA CAGGTGTTTC CGAAGCCACC TCAATAGATG CCGCTGGCGC TATAGATTTT
GAAGACAGTG TCGTTGTTGG TATAGAGAAT TATTTTCAAA CGTCGTTACA GGCGGGGCAC
TACTCACAGA TTAAGGTTTG TACTGGCCAA AATGTGTTAA GTGCTGAGCT TACAGACCAA
AAAAACAATC ACTTGGCGAA TCAAAGCCTC ATTGTAAGTC TACAGCCTAA GCGCACTTAT
TATTATCAAG TCAGTCATGT AGAAAAAGGG GTTACGCCAG TAATTAGAGC GGTTAATACC
TCTGAGGCCA TAGAGTTGCT TAAAGGCTCT ATTGAGCAAA CGCATCAAAT CAGCCGAGTT
GTCACTGATA ACTGTAGGCA ACCACCCACT CAAACCATTA CAACTCATCC AGTGACCACA
CCTGTAATGG AGACTCAGAA ACCGATAAAT CTTGATGTGC TATTTGATTT TGATAGTGCT
CAGATAAAAG GAAAATATCA ACAAAAAATA CAACCACTTG CGGAGTATAT GCAGGCCAAT
CCAGAGGCTA CTGTACATTT AGAGAGTCAT ACCGATAGTA AAGGAGCAGC TGGTTATAAC
TTGAAATCAT CCTCTTAA
 
Protein sequence
MIFKTLLIPS VLITMLATGC QSTAFMASAD NPIGSIASTP VSTTDGVRQV DTARWTKTGQ 
VFTTPDDSAL AANESRIVIF RTPTGVSEAT SIDAAGAIDF EDSVVVGIEN YFQTSLQAGH
YSQIKVCTGQ NVLSAELTDQ KNNHLANQSL IVSLQPKRTY YYQVSHVEKG VTPVIRAVNT
SEAIELLKGS IEQTHQISRV VTDNCRQPPT QTITTHPVTT PVMETQKPIN LDVLFDFDSA
QIKGKYQQKI QPLAEYMQAN PEATVHLESH TDSKGAAGYN LKSSS