Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1049 |
Symbol | |
ID | 5204745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1257384 |
End bp | 1258241 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640599270 |
Product | Outer membrane protein and related peptidoglycan-associated (lipo)protein-like protein |
Protein accession | YP_001279949 |
Protein GI | 148652856 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.547812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTTA AAACCCTACT AATACCAAGT GTATTAATCA CAATGTTAGC AACAGGCTGC CAATCTACAG CTTTTATGGC TTCAGCGGAT AACCCTATAG GAAGTATAGC AAGTACACCT GTGTCAACGA CGGATGGCGT TCGTCAAGTC GACACGGCTC GCTGGACTAA AACGGGTCAA GTATTTACGA CTCCTGATGA TAGTGCATTA GCCGCTAATG AGAGTCGTAT TGTTATATTT CGCACGCCTA CAGGTGTTTC CGAAGCCACC TCAATAGATG CCGCTGGCGC TATAGATTTT GAAGACAGTG TCGTTGTTGG TATAGAGAAT TATTTTCAAA CGTCGTTACA GGCGGGGCAC TACTCACAGA TTAAGGTTTG TACTGGCCAA AATGTGTTAA GTGCTGAGCT TACAGACCAA AAAAACAATC ACTTGGCGAA TCAAAGCCTC ATTGTAAGTC TACAGCCTAA GCGCACTTAT TATTATCAAG TCAGTCATGT AGAAAAAGGG GTTACGCCAG TAATTAGAGC GGTTAATACC TCTGAGGCCA TAGAGTTGCT TAAAGGCTCT ATTGAGCAAA CGCATCAAAT CAGCCGAGTT GTCACTGATA ACTGTAGGCA ACCACCCACT CAAACCATTA CAACTCATCC AGTGACCACA CCTGTAATGG AGACTCAGAA ACCGATAAAT CTTGATGTGC TATTTGATTT TGATAGTGCT CAGATAAAAG GAAAATATCA ACAAAAAATA CAACCACTTG CGGAGTATAT GCAGGCCAAT CCAGAGGCTA CTGTACATTT AGAGAGTCAT ACCGATAGTA AAGGAGCAGC TGGTTATAAC TTGAAATCAT CCTCTTAA
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Protein sequence | MIFKTLLIPS VLITMLATGC QSTAFMASAD NPIGSIASTP VSTTDGVRQV DTARWTKTGQ VFTTPDDSAL AANESRIVIF RTPTGVSEAT SIDAAGAIDF EDSVVVGIEN YFQTSLQAGH YSQIKVCTGQ NVLSAELTDQ KNNHLANQSL IVSLQPKRTY YYQVSHVEKG VTPVIRAVNT SEAIELLKGS IEQTHQISRV VTDNCRQPPT QTITTHPVTT PVMETQKPIN LDVLFDFDSA QIKGKYQQKI QPLAEYMQAN PEATVHLESH TDSKGAAGYN LKSSS
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