| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1047 |
|---|
| Symbol | |
|---|
| ID | 5204743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1254202 |
|---|
| End bp | 1254897 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640599268 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001279947 |
|---|
| Protein GI | 148652854 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAAA TACTCATCAT CGAAGATAAC CCAGATATTG TGGCCAACGT CTATGCCTTT
TTTGAACCCA AAGGTTATCA GCTCGATAAC GCTCATAATG GTCCAAGCGG CTTAACGCTG
GCCGCTGAAA ACACTTATGA TGTTATCTTG CTCGATGTGA TGCTGCCAGG CATGGATGGC
ACACAGCTGT GTAAAGCACT AAGAGAAAAA CTGCACAATA AAACCCCCGT GTTAATGCTC
ACAGCGCGCG ATACCTTATC AGATAAAGTG GCCGGATTTG ACAGTGGTGC CGATGATTAT
CTGGTCAAGC CCTTCTCTTT GGTAGAGCTT GAGGTCAGAG TCAGAGCACT TATCCGCCGT
CATCAAGGTG AGTTTTTTGA GCAAGATATT AAACTGGGTC CTTTGACTCT AAATATTGAA
AAGCACACCG CTTATCGAGA CGATATCCCA CTTAAACTGA CCCCGACTGG CTTTAAAATT
CTACAAACCT TAATGCAGTC TTATCCCAAT ATAGTGAGTA AGTCGGAGCT TGAAGAAAAG
GTCTGGGGTG AAGATCTGCC CAATAGTGAT GCGTTACGTA CCCATTTGCA TAGCGTGCGT
ACTCAAGTCG ACAAACCCTT TGATCACGCC ATGCTGATCA CCGTGCCTGG TGTGGGTTAT
CAAATGATTA GTCCTGAAGA TAAGCGCGCC TTATAA
|
|---|
| Protein sequence | MHKILIIEDN PDIVANVYAF FEPKGYQLDN AHNGPSGLTL AAENTYDVIL LDVMLPGMDG
TQLCKALREK LHNKTPVLML TARDTLSDKV AGFDSGADDY LVKPFSLVEL EVRVRALIRR
HQGEFFEQDI KLGPLTLNIE KHTAYRDDIP LKLTPTGFKI LQTLMQSYPN IVSKSELEEK
VWGEDLPNSD ALRTHLHSVR TQVDKPFDHA MLITVPGVGY QMISPEDKRA L
|
|---|
| |