Gene PsycPRwf_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1046 
Symbol 
ID5204742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1252822 
End bp1254156 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content44% 
IMG OID640599267 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001279946 
Protein GI148652853 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATA CCGATACAAT CGCCAATAAG TTTCGCTTAT CCTACCTACT CTTCACCATC 
TTGCTGTGTG CCACTTTTAT TGCCATATTT GAGGTTGCAG AAGATAAGAT TGAAGCGCTG
TTGGTACAAA GCTATCTGTT ACAGCAGCTA CAATTGACCA CCGAGGTGGC TGAAGCCAGC
TTACAATCTA CCCCAGTCAC TCCAGGTCTT GGGGTAAGTA TCTATCCGTT AAGCTCAGCA
CCACAAGCCC TTAAAGCTCA AGCTACTTCC AACATACAAC AAAAAAGTGT GGTCACGAAA
AAGGGGCAAG AAGCAGATTT GTATTTTTTT AACTATCATT ATGAGGGACA TGATTATCTT
TTAAGTTACC TAGATACAGG GGCTACGCCT CAGCAGCTGC CGGCCCGCTA CGGCGATAGC
GATCAATATC CAGTACTGGC ACTTTTTGAA GAGCTAGAAG CCATATTTTT GCGAGCCTTG
GTTGGGGTGA TTTTACTGAG TATTCTGATG GCTTTTATCT TCTCTTATCT GTCATCTAAA
GCCATTATCA AACCACTTCT TGACCTAAAA GATGCGGTAG AAGCCGATCA GCATAACTTT
GATGAGCTCA CTGACCTGCC TTCAGAGGTT GGGGTATTGG CACGTGCCAT TGATGACAAA
AATAACAAAC TTGAGCAGTA TCTCAAGCGT GAGCAGCTAT TTACCGGCGA CGTCAGTCAT
GAATTAAGAA CCCCCTTAAC CATTATTATG GGGGCATCAG AGGTATTACA GGCGCAGTTA
TCAGATCACC CTAAAGCCTT AGAATTCACT CAGCGTATTA ACACTACAGC CAAAGAGACG
TCAGAGATAA TCAGCGCTTT ATTGCTTTTG TCACGTGCCC CTGAGAAGCT TGACGCACCT
AAGATCTGCA TCAATCACAT TGCCCAAAGT GAGGTGACAC GCTTAAGTTA TCTACTTCAA
TACAAGCGCG TGACTTGCCG TATAGAAGCG GCTGAAGATT ACCACACCTT TGTGCGGCCA
GAGCTGCTTA AAATGGCTTT GGGTAACTTA ATCAAAAATG CGTTTCAATA CACAGACTCA
GGCGAGGTGG TTATTGTCAT TGATGAGCAG AGCATCTCAG TGTCAGATAC CGGACTGGGC
ATTCCGGATC ATATGATGCC GCTGTTATAT AAGCGCTTCG AGCGAATTGA GCCCAAAGAA
CTTAAAGTTG AAGGCTCAGG TCTTGGACTT AGTATTGTGC AGCGTATTAT GAGTCACCTA
GGTTGGCGCT TAACACATAG TAGCAATAAG GCAGGCGGTA GTACTTTTAC CATACATTAT
GGCCAAGCAC GCTAA
 
Protein sequence
MFNTDTIANK FRLSYLLFTI LLCATFIAIF EVAEDKIEAL LVQSYLLQQL QLTTEVAEAS 
LQSTPVTPGL GVSIYPLSSA PQALKAQATS NIQQKSVVTK KGQEADLYFF NYHYEGHDYL
LSYLDTGATP QQLPARYGDS DQYPVLALFE ELEAIFLRAL VGVILLSILM AFIFSYLSSK
AIIKPLLDLK DAVEADQHNF DELTDLPSEV GVLARAIDDK NNKLEQYLKR EQLFTGDVSH
ELRTPLTIIM GASEVLQAQL SDHPKALEFT QRINTTAKET SEIISALLLL SRAPEKLDAP
KICINHIAQS EVTRLSYLLQ YKRVTCRIEA AEDYHTFVRP ELLKMALGNL IKNAFQYTDS
GEVVIVIDEQ SISVSDTGLG IPDHMMPLLY KRFERIEPKE LKVEGSGLGL SIVQRIMSHL
GWRLTHSSNK AGGSTFTIHY GQAR