Gene PsycPRwf_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1022 
Symbol 
ID5206560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1215178 
End bp1216593 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content47% 
IMG OID640599243 
Productpeptidase U32 
Protein accessionYP_001279922 
Protein GI148652829 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0199703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAT CAAATCAAAT CGCTCCTGCT CCTCGCGCCC CAGAGCTACT TTGCCCTGCG 
GGTACATTCA AAAATATGCA GTATGCTTTT GCTTACGGTG CCGATGCGGT TTATGCCGGG
CAGGCACGTT ATAGCCTGCG CGTGCGTAAC AATGATTTTG ATGAAGACAA TTTGCGCCGT
GGTATTGAGT ATGCACACAG CTTGGGCAAG AAGTTTTATG TGGTGGTCAA TATCCAAGCC
CATAATGCTA AGCTTAAGAC CTTTATCGAG GACATCCGTC CTGTGATTGA GATGAAACCT
GATGCACTGA TTATGTCGGA TGCCGGCATG ATTATGATGG TGCGTGAACA TTTCCCTGAT
ATAGAAATCC ACTTATCCGT ACAGGCCAAT GCGGTTAACT GGGCCACTGT TAAGTTCTGG
AAGCAAATGG GGGTAAGCCG CGTTATCGTC TCACGCGAGC TGTCATTAAA GGAGATTAAG
CAAATCATCG ATGAAGTGCC AGGCATGGAG ATTGAAGTTT TTGTCCATGG CGCATTATGC
ATGGCCTACT CTGGTCGCTG TCTGCTATCC GGCTATATCA ACAAACGTGA TGCCAACCAA
GGCACCTGCA CCAATGCTTG CCGCTGGAGC TACAATACTT ATAAAGCTCA AGAAAATGAA
ACGGGCGATA TTGTACCAGT ACAAACCTTC AACCCAGCTC AGCAAATCGA CACTGTTAAT
TTAAATGGTG ACGTGGTTAT GGGCGATGAC TATGTCCAAG CGCCAAGCGA TGAGGTGGTG
TTGCTAGAAG AGCAAAACCG TCCAGGTGAG TTAATGGCCA TGTACGAAGA TGAGCATGGT
ACCTATATCA TGAATTCTAA AGACTTACGA GCGGTAGAGT TGGTGCCTGA GCTGACTCAA
ATGGGCGTAC ATTCTTTAAA AATTGAGGGT CGAACCAAGT CGCATTATTA TGTGGCTCGC
ACCGCTCAGG TATACCGTCA AGCCATTGAT GATGAGGTGG CAGGTAAGCC TTTTGATGAG
TCATTGATCG GTGCTTTAGA TGGGTTAGCC AACCGTGGTT ACACCGAAGG CTTCTTACGT
CGTCATGTCC ACAGCGATTA TCAAAACTAC GAATATGGTG CTTCAAAAAC AGATCAACAG
CAGTTTGTGG CCGAAGTCAT CGACATCAGT GCTGAGCGTC TAACGCTTGA GATTAAAAAT
AAGCTTGAGG TCGGCGACAC CATCGAGATT ATGACCCCAC AAGGTAATGT TACCTATACG
CTTGAGCAGA TGTGGGACAA AAAAGGCAAT TCGATTGAGG CGGCTTTAGG GTCAGGTTGG
GTGGCCCAGA TTAGTAACCC CTTTAAAGAG ATGGACAAGG ACACTTTGCA ATTTGCGTTG
GTCATGAAAA ACGTAAAGCA GGCCATTTTC AGCTAA
 
Protein sequence
MTQSNQIAPA PRAPELLCPA GTFKNMQYAF AYGADAVYAG QARYSLRVRN NDFDEDNLRR 
GIEYAHSLGK KFYVVVNIQA HNAKLKTFIE DIRPVIEMKP DALIMSDAGM IMMVREHFPD
IEIHLSVQAN AVNWATVKFW KQMGVSRVIV SRELSLKEIK QIIDEVPGME IEVFVHGALC
MAYSGRCLLS GYINKRDANQ GTCTNACRWS YNTYKAQENE TGDIVPVQTF NPAQQIDTVN
LNGDVVMGDD YVQAPSDEVV LLEEQNRPGE LMAMYEDEHG TYIMNSKDLR AVELVPELTQ
MGVHSLKIEG RTKSHYYVAR TAQVYRQAID DEVAGKPFDE SLIGALDGLA NRGYTEGFLR
RHVHSDYQNY EYGASKTDQQ QFVAEVIDIS AERLTLEIKN KLEVGDTIEI MTPQGNVTYT
LEQMWDKKGN SIEAALGSGW VAQISNPFKE MDKDTLQFAL VMKNVKQAIF S