Gene PsycPRwf_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1021 
Symbol 
ID5206559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1214122 
End bp1214925 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content48% 
IMG OID640599242 
Producthypothetical protein 
Protein accessionYP_001279921 
Protein GI148652828 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.47504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0154431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCC CCCAGTCGTA TTACCTCAAA GCTTTCAATA TCCTACTGTT TATCACCGGG 
CTTATTTTAG TAATAGACTG TGCCATTTTA ATTGCCGCTG ACAAAATTAA CTTTGGCACC
CTAGTCCCTT TTGTGCTGGG TCTGATATTT ATCATTCATG CCGTATTTTG GCATAAGATA
AAAGCCAAGC TACAGGTAAG TAAACACTGG CGTATGGTTT GGAAGCTGCT GTGGGCAATA
TTTGTCCTGT GGCTGATAAG CTTTATTGTA TTTGCCTTTT CATTGCACAA AAATATTAAG
CAAGTTGACC AACCGTATGA GACAGTGGCG GCCATTATCG TACTTGGGGG CGGTATTCAA
GATGGCTTGC CCACCCCCAC TTTGGCCAGT CGCTTAGACG CCGCTGCTCC CTTAATAAAG
GAACAACCCC AGGCGGTGGT CATCACCAGC GGCGGCATCG GCATGGGTGA GATACGCAGT
GAAGGTGAGG CCATGGCTCG CTATCTGTAC GCGCTTTATG GCATCCCACT TGAGCACATT
CAACAAGAAA AAAACAGCAC CAGTACTGAG GAGAATTTCT TGTTTAGTCA GCAGATTTTG
ACCGAGCAAG GCATCTCTTT AAATGACCCA ATTGCTGTGG TGACCAGTGA CTTCCACATC
CCGCGCTCGC TGGCCATCGC TGAGCATCAA GGCTACACCA ATCTGGTGGC ACTTGCCAGC
ACCACCCCGC TCTCGATACG TTACAACTCT TGGTTTCGAG AGTATTTTGC CTACATCAGT
GGTTGGCTGT TGGGCGAATA TTAA
 
Protein sequence
MPIPQSYYLK AFNILLFITG LILVIDCAIL IAADKINFGT LVPFVLGLIF IIHAVFWHKI 
KAKLQVSKHW RMVWKLLWAI FVLWLISFIV FAFSLHKNIK QVDQPYETVA AIIVLGGGIQ
DGLPTPTLAS RLDAAAPLIK EQPQAVVITS GGIGMGEIRS EGEAMARYLY ALYGIPLEHI
QQEKNSTSTE ENFLFSQQIL TEQGISLNDP IAVVTSDFHI PRSLAIAEHQ GYTNLVALAS
TTPLSIRYNS WFREYFAYIS GWLLGEY