| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1019 |
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| Symbol | |
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| ID | 5206557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1211941 |
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| End bp | 1213701 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599240 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001279919 |
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| Protein GI | 148652826 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000406917 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00437661 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCAAG TTACTAGCCA ATCAACCCGA GTGGAACCTA AGGTAAAGCC TAAGTTTGAC
GCGTTTGATT TTCGTAAATA CCAACCTTTT GCTTTTGCAC CCAACTTATC TGATCGCACA
TGGCCAAATA AGACCATTGA AAAAGCGCCG ATTTGGGCCA GTGTGGATTT ACGTGATGGT
AACCAAGCTC TGATTGATCC TATGACCATC GAACAAAAGA TGCAGTTCTT TAAACTGCTG
GTCGAAGTAG GCTTTAAAGA AATTGAAATT GGGTTTCCAT CAGCTGCGCA AGTGGAATTT
GACTTTGCGC GTAAGCTTAT CGAGGAAGGA CATATTCCAG AGGATGTGAC CATTCAGGTA
TTGGTGCAGG CACGTGAGCA TTTAATTGAA CGCACCTTTG AGGCGCTAAA AGGCGTACGC
CGCGCTGTGG TCCATGTGTA CAACTCTACC AGCCGTGTGC AACGTGATAA GGTTTATGCC
AAAGACCTTG AGCAGATTAA GCAAATTGCG ATAGAAGGCG CAAAAATGCT GCAAGACCAT
GCCGCCAAGC ATCCTGAAAC AGAATGGGTG TTTGAGTATT CACCAGAAAG CTTTAGCCAA
ACTGAACCCG ATTATGCGGT GCAAGTGGTG GATGCGGTTA ACGAGGTGTG GAAGCCTGAA
GAGGGCCAAG CGGTGATCAT CAACTTGCCA GCTACGGTTG AGTCATCCAT GCCAAACGTC
TATGCCGATC AAGTCGAGTA CTTTTGCCGT AATATAAAAA ACCGCGAGCA TGTGATCATC
AGCTTGCACA CCCACAATGA CCGTGGTAGT GCAGTGGCCG CCGCTGAGCT TGGGGTGTTG
GCCGGCGCCG ATCGCATCGA GGGCACACTA CTTGGTAACG GCGAGCGTAC CGGTAACATG
GATATTATGA TTATGGCCAT GAACTTATAT AGTCAAGGCG TTGATCCTGA GCTTGATCTA
AGTGACATGA GCCGCATTGT GCAAGTGGTC AGTGAGTGCA ATAACTTGCC GGTGCATCCA
CGCCATCCTT ATGTGGGCGA GTTGGTGTTT ACCGCCTTTA GTGGCTCGCA CCAAGATGCG
ATTAAAAAGT CACTTGATTA CAATGAGAAA AACAGCGATG CCACTCAAAA TATCTGGGAT
GTGGCCTACT TACCGATTGA TCCCGCTCAT ATTGGCCGCA GTTATCAAGA TGTGGTGCGC
ATTAACAGTC AGTCTGGTAA AGGGGGCGTG GCTTATATTC TACAGCGCAA CTATGGCTTT
AACTTGCCGC GCTGGATGCA AATTGACTTT AGCCGCGTAG TACAGCAAAA AGCGGAAGAG
GCAGCGCGTG AGCTCAAAAA TGAGGAAATC TTAGAAGCCT TTGAGTCCAC TTATCTACAT
AATTCAGGCT TTGAGCTATT AGATCATAGC GTGAATAACA AAGGCGGTGA CGTTGAGTTT
AGCGGGCAAG TGATTATCAA TGGCGAAACC GTTGAAATCT CCGGCAAAGG TAATGGTCCG
TTGTCGTCAT TTATTGATGG GGTTGCACGT CACACAGGCA AGAAGCTGCA TATTATTAAT
TACTCAGAGC ATGCCATGAC TCAGCCTGTG GCCAATATGA GTGAGGATGA GGATACCACC
AGCGATAAGA CCAATGCCAC AGCGGCAGCT TATATTCAGC TCAACGTGGA TGGCGAGATT
TACTCAGGTA TTGGCACCCA CACCAGTACA GTATCTGCCA TGTTGCGCGG TGCCCTATCT
GCCTTATCGC AAGCTTTTTA A
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| Protein sequence | MSQVTSQSTR VEPKVKPKFD AFDFRKYQPF AFAPNLSDRT WPNKTIEKAP IWASVDLRDG
NQALIDPMTI EQKMQFFKLL VEVGFKEIEI GFPSAAQVEF DFARKLIEEG HIPEDVTIQV
LVQAREHLIE RTFEALKGVR RAVVHVYNST SRVQRDKVYA KDLEQIKQIA IEGAKMLQDH
AAKHPETEWV FEYSPESFSQ TEPDYAVQVV DAVNEVWKPE EGQAVIINLP ATVESSMPNV
YADQVEYFCR NIKNREHVII SLHTHNDRGS AVAAAELGVL AGADRIEGTL LGNGERTGNM
DIMIMAMNLY SQGVDPELDL SDMSRIVQVV SECNNLPVHP RHPYVGELVF TAFSGSHQDA
IKKSLDYNEK NSDATQNIWD VAYLPIDPAH IGRSYQDVVR INSQSGKGGV AYILQRNYGF
NLPRWMQIDF SRVVQQKAEE AARELKNEEI LEAFESTYLH NSGFELLDHS VNNKGGDVEF
SGQVIINGET VEISGKGNGP LSSFIDGVAR HTGKKLHIIN YSEHAMTQPV ANMSEDEDTT
SDKTNATAAA YIQLNVDGEI YSGIGTHTST VSAMLRGALS ALSQAF
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