| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1015 |
|---|
| Symbol | |
|---|
| ID | 5206860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1208098 |
|---|
| End bp | 1209396 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640599236 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001279915 |
|---|
| Protein GI | 148652822 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0661] Predicted unusual protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000662027 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000135792 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATT TATTGAAAAA ATCCTTCAAT GTTGTCAATC GTGTCCGTCA CACTGCCAGT
GTGGCCGGCT TATCTGCATT GCGTGTGGCC AAAGGTGAGC GTCCAGATGC GGTCATGCTG
CGTGAGACGT TCGAGCAGCT TGGCACCACT TATATCAAAA TTGGTCAGTT TATCGCCAGC
ACGCCCTCCT TGTTTCCGCG TGACTATGTG ATTGCCTTTC AAGGCTGCTT AGACCAGACC
ACGCCGCTGC CGTATCAGTA TATTGAAGGG GTATTAAAGC AAGAGCTGTT AACAGACCAT
CACAGCTTAG ATGAGTTGTT TTTGCATATC GATGAGACGC CGCTGGCGTC TGCTAGTATC
GCCCAAGTGC ACGCGGCAAC GCTGCGTGAT GGCCGTGATG TGGTGCTAAA AGTCCAAAAG
CCGGATGTCG ATGTGATCAT GCAGACCGAT CTTGGGGTGC TACACGGGGT GACCAAGATT
ATGGAGCGCT TAATGCCGCA AATGCGTTTT GCCAGTATCT CGCCGATTAT CGATGAGATT
CGCACCCGTA TGTTGGCTGA GACCGACTTT ATCGCTGAGG CGTCTAATAT CCGTGATTTT
CAGCAGTTTT TACAGATGAC GGGCAATCAA AAGGTGGTGG CGCCTGAAGT GGTGGATGAG
CTGACCACCA AAAAAGTGCT GACCATGAGC CGCTTGCATG GCATCTCTAT GGTTGATGAG
GTGGCGATGC GCCAATATAG CGCAGATCCT GCGCAAGTGA TGGCCGATAC GCTCAACACT
TGGTTTGCAA GCCTAATGAT GTGCAACAGC TTCCATGCTG ACCTGCACGC TGGCAACTTA
ATGCTGCTTA AAGATGGGCG TATTGGCTTT ATTGATTTTG GTATTGTCGG TAAGCTAAAG
CCTGAAAGCT GGCAAGCGTG TATGGGTATG ATGCAAGCGC TACAGGACAA TGATTATGTG
ACCATGGCCG GCTGTATGAT TGATATGGGC ATGACTCATG ATCGTGAGCA AGTCGATCAG
GCACAGCTGG CCGGTGATTT GGCAAAAATG ATTACCCGCA TTATGGCAGA GGATAAAACC
TATACCAGTG GCAAGCCATT TAATACCAAA GAACAGGCCG ATGAGCTAAA CAAAATGATG
CTAGAGATTG TTGAGGTCGG CAAACGCCAC GGTATTCATT TCCCGCGCGA CTTTGCGCTG
CTGACCAAGC AAATGCTGTA TTTTGACCGC TTTATGCGCA CGCTTGCACC CGACATGGAT
ATGTTTAATG ATGCCCGCGT CAGCTTGCTG GGCAGATAA
|
|---|
| Protein sequence | MSNLLKKSFN VVNRVRHTAS VAGLSALRVA KGERPDAVML RETFEQLGTT YIKIGQFIAS
TPSLFPRDYV IAFQGCLDQT TPLPYQYIEG VLKQELLTDH HSLDELFLHI DETPLASASI
AQVHAATLRD GRDVVLKVQK PDVDVIMQTD LGVLHGVTKI MERLMPQMRF ASISPIIDEI
RTRMLAETDF IAEASNIRDF QQFLQMTGNQ KVVAPEVVDE LTTKKVLTMS RLHGISMVDE
VAMRQYSADP AQVMADTLNT WFASLMMCNS FHADLHAGNL MLLKDGRIGF IDFGIVGKLK
PESWQACMGM MQALQDNDYV TMAGCMIDMG MTHDREQVDQ AQLAGDLAKM ITRIMAEDKT
YTSGKPFNTK EQADELNKMM LEIVEVGKRH GIHFPRDFAL LTKQMLYFDR FMRTLAPDMD
MFNDARVSLL GR
|
|---|
| |