| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1012 |
|---|
| Symbol | |
|---|
| ID | 5206857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1204643 |
|---|
| End bp | 1205806 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640599233 |
|---|
| Product | cytochrome P450 |
|---|
| Protein accession | YP_001279912 |
|---|
| Protein GI | 148652819 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2124] Cytochrome P450 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000117007 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGCA ATTCTAAAAT CAAAGCGTTA TATTCAGAAG ATGATCAGCG AAGCCTGACA
GATAAGCGGC GGCAGCAGCA GGATATTATA AAAAACGAGG CCGGTGAGTG GGTACTGTTA
CGCCATGCTG ATGTGAAGGC GGCGGCGCTT GATGATGCCA CTTTCTCTAG TCATGTCTCG
CGGTTTTTGC AAATCCCGAA TGGCTTAGAC GGCGCAGAGC ATGATCAGTA TAGAGCACTG
ATTAACCGCT ATCTTAGTCA AGACGCCATT ACCCCTTATG TGCCGCTGTT TCAACACGTG
GCAACAGAGC TTGTATCGGG GCTACCTAAA GGGGAGGTCA TTAATGCGGT TACGGATATA
GGCACTGTCT TTGCAGTACG TGCTCAGTGC CAATGGCTAG GCTGGCCAGC AGAGGTTGAG
CCTATCTTAG TACAATGGGT CAATGACAAT CACCAAGCCA GCCGCTTAAA AGACCATACC
AAGCTTGCAA CAGTAGCACA GGATTTTAAT GAAATTATTC GCTCGGTTAT CGCCCCATTT
CGGGATACAG ACTCTGCTGC TGCTAGCCAT AACAAAGCAA ATCAAGACAG CATAACAGCT
CAGCTATGCC GTGAGCAAAT AAAGGGACGC CCACTTAGCG AGGCGGAAAT CGTGTCTATT
TTGCGCAATT GGACTGGGGG TGATTTGGGG TCTATGGCAT TATGTGTGGG CGTAGTGGTG
GCTTATCTTG CCCATCATCC TAAACAGTTA CAGCACTGTG CCAATGCCTC TGATGCAGAG
CTTGAAGCCA TTATTGATGA GATACTGCGT CTTGATAATC CTTTCCCCTC AAACCGTAGG
ATAACCAAGT GTCCGGTGAC TCTAGGCGAG CATCAATTGC CTGAAGGGGC TAAGGTGCAT
TTAGACTGGA TTTCAGCAAA CCGCGATGAG GCCGTATTTG GTAAAGATAC CTTTGATCCA
GTCAGACATG CAGCGGATAA TCTGGTCTAT GGTATTGGCC GTCATGTGTG TCCTGGGCGA
TTATTGGCTA CTTGGCAGCT TAGAATCCTT ATCCGAGCAC TGCTTGCGCA TGTAGAGGCG
ATCACGCCAG CGCCGAATGA GTCATTTGAA CGGCAGCTGC CTCCATTAGG TGGATATAGC
CGTGTGCCTG TTGTTTTAAG TTAA
|
|---|
| Protein sequence | MFGNSKIKAL YSEDDQRSLT DKRRQQQDII KNEAGEWVLL RHADVKAAAL DDATFSSHVS
RFLQIPNGLD GAEHDQYRAL INRYLSQDAI TPYVPLFQHV ATELVSGLPK GEVINAVTDI
GTVFAVRAQC QWLGWPAEVE PILVQWVNDN HQASRLKDHT KLATVAQDFN EIIRSVIAPF
RDTDSAAASH NKANQDSITA QLCREQIKGR PLSEAEIVSI LRNWTGGDLG SMALCVGVVV
AYLAHHPKQL QHCANASDAE LEAIIDEILR LDNPFPSNRR ITKCPVTLGE HQLPEGAKVH
LDWISANRDE AVFGKDTFDP VRHAADNLVY GIGRHVCPGR LLATWQLRIL IRALLAHVEA
ITPAPNESFE RQLPPLGGYS RVPVVLS
|
|---|
| |