| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1003 |
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| Symbol | |
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| ID | 5205544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1193074 |
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| End bp | 1194072 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599224 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001279903 |
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| Protein GI | 148652810 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.194559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000278765 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGACA GGGCACCATT TAAAGTCGTT ATCGTAGGAT TTGATGGGGT GCTGGGCAGC
GCCCTGACGG GTGCTCTAGA TTTATTCTCT TTTACCGGTG TCAGTTGGCA GCGTTTTTTG
GATCAAGACA TACAGCCTAA ATTTAACGTA CAGATTGCCA GTTTACAAAA GGCCGATATT
CGCTGTAGTA ATCGTTTAAT TATCCAAGCG CACTGTGATA TCAAAGACAT TGAACACTGT
GATTTGCTGC TTATTCCCAC TATTGGCGAC TCTATCGACA AGGTATTGGC ACACAGCACT
GAGCTGCTAA CTGAGCTGCA GCGCCTTGCC AACACTGGTA CCGATATAGC CAGCAACTGT
AGTGGCGCCT TTTTATTGGC AAAAGCTGGT CTATTAGAGG GAAGAGCGGC GACTACTCAC
TGGGGCTATG CCAATAAATT TAAGCAAGAT TTTCCCAATG TGAACCTGCA ACAACAGCAC
TTCGTCACTC AGTCAGATAA TATATTTTGC GCCGCAGGCG GCAGTGCGTT TTATGATTTA
GCGCTATTGT TAATAGAGCG CTATTGTGGG CGTGAAATCT CAGCGCAAGT GGCCAAGACT
CAAGTAATTG ACAAAAAAAC CGGTCATCAG GACAGTTATA CCAATGTCAC CTTGCATACG
CCACACTCAG ACCCAGTGGT GAGCCAAGTT CAAGAGTATA TCGAACAAAA TTTTGCCGAG
CCGCTGCAAG TCAGTGACTT GGCCAAGCGG GTCAATATCA CACCGCGCAC CTTAAACCGC
CGCTTCCAAT CCTGCCTGTC TATGCGGCCG ATAGAGTATA TTCAAGCGGT ACGTATTGAG
CAGGCAAAAC GCCTATTAGA GTCGGCCGAT GTGAGCATCA AGTCACTCGC CTATCAAGTG
GGCTATCATG ATTTATCCTC ATTTAGCCGT TTGTTTAAAC GTGCCACGCA CCTAACCCCA
AAAGCGTATC AAAATAAATT TGCTCGCACT GTTAGCTGA
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| Protein sequence | MSDRAPFKVV IVGFDGVLGS ALTGALDLFS FTGVSWQRFL DQDIQPKFNV QIASLQKADI
RCSNRLIIQA HCDIKDIEHC DLLLIPTIGD SIDKVLAHST ELLTELQRLA NTGTDIASNC
SGAFLLAKAG LLEGRAATTH WGYANKFKQD FPNVNLQQQH FVTQSDNIFC AAGGSAFYDL
ALLLIERYCG REISAQVAKT QVIDKKTGHQ DSYTNVTLHT PHSDPVVSQV QEYIEQNFAE
PLQVSDLAKR VNITPRTLNR RFQSCLSMRP IEYIQAVRIE QAKRLLESAD VSIKSLAYQV
GYHDLSSFSR LFKRATHLTP KAYQNKFART VS
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