Gene PsycPRwf_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1000 
Symbol 
ID5205699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1189695 
End bp1190552 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content41% 
IMG OID640599219 
Productalpha/beta hydrolase fold 
Protein accessionYP_001279900 
Protein GI148652807 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000731693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000950161 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGTAC ACACATCGCT CTATCAATGG ACAACTGTAC CTACTGAGTT TATTAGTGCA 
GATGGCATTG GCTTTGCCTA TCGTGAGTAT GGTCAGCAAA ATGGTGGCAC ACCCATCATA
TTTTTAAACC ATTTGGCAGC GGTTTTAGAC AATTGGGATC CTCGCATTAT GGATGGTATC
GCCCAAACAC ATCACGTTGT GGCGTTTGAT AATCGCGGTG TGGGTGCATC GACAGGGAGA
GTAGCTGAAT CGATAGAGCA AATGGCTGAT GACGCTATTA CTTTCATTAA AGCAAAAGGC
TTTGATAAGG TTGATTTATT TGGCTTCTCT ATGGGCGGTA TGATTTCACA AGAAATAGCG
TTAAAAAAAC CCAGTTTGGT GAGAAAAATG GTGATATCGG GTACAGGGCC CGCTGGAGGG
AGGGGCATCT CTAAAGTCAA TAGAGTGGCT AATTTTGAGC TTCTTAGGGG CTTGCTGACA
CGTCAAGATC CTAAAGTTTT TCTATTTTTC ACGCGTACTG ACAATGGAAA GCGTGCGGCA
AAAGCGTTTA TTCAACATAT TAATGAACGG ACTCAAGATC TTGACAAAAA AATCACTATT
GCAGCATATC GTGCTCAACT TAAAGCATTG AAAAAGTGGG GTAACAAAAA CCCAGTCGAT
CTTTCTGTTA TCAAACAGCC TACTTTGGTC GCCAATGGAG AGCATGATCG TATGGTGCCA
ACGCTCAATA CTTATGATTT AGCAAAGCGA TTGCCCAACA GTCAGTTAAT CATATATCCA
GATGCTGGGC ATGGTGGTAT TTTTCAAAAT CATAAAGATT TTATAAAACA GACGCTTAAT
TTTTTAGCGA ATAATTAA
 
Protein sequence
MPVHTSLYQW TTVPTEFISA DGIGFAYREY GQQNGGTPII FLNHLAAVLD NWDPRIMDGI 
AQTHHVVAFD NRGVGASTGR VAESIEQMAD DAITFIKAKG FDKVDLFGFS MGGMISQEIA
LKKPSLVRKM VISGTGPAGG RGISKVNRVA NFELLRGLLT RQDPKVFLFF TRTDNGKRAA
KAFIQHINER TQDLDKKITI AAYRAQLKAL KKWGNKNPVD LSVIKQPTLV ANGEHDRMVP
TLNTYDLAKR LPNSQLIIYP DAGHGGIFQN HKDFIKQTLN FLANN