Gene PsycPRwf_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0998 
Symbol 
ID5205697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1187244 
End bp1188155 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content44% 
IMG OID640599217 
Productalpha/beta hydrolase fold 
Protein accessionYP_001279898 
Protein GI148652805 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.461316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000131083 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAACAT TTGATCGCAC AATAACATTA GATGGTAAAA AAGCACGCTA CTATGACCTG 
TCTGATTTGG CTCATAAAAC AGCCAACCTC CCCTTAGCGC CTGCACATTT TTATGGGGGG
AATGGCTTTA CGACAGGTGT CTATTTGCCC TTATTAACCA AACTTAGTGA GCAGTTTACT
ATCACCAGTC TTGCCTTACG TGGCTATTGG CATGACCTAC CTACTGTCAA AAAGTTAACG
CGTGAAGAAG ATGCCGATAT CTTGATCGAC TTTTTGGAGA AAACTCAAGA CAAACCCATC
GTCGGCATCG GACATTCGCA AGGCGCTACC GCTACTGCTA TTGCGGCAGC CAAACGTCCA
GAGCTATTTT CAGAGCTGTA CTTAATAGAG CCGGTGACGT TTACCAAATC TCAGACACAA
ATGATGAATG CAGCGCCAGA TGAAGTGAAG ATCACGCAAG AACCTTTTAA GAGCACACGA
GCAAAGCAAG CAGATTGGGA GAGTATTAAC GCCTACTACG ATTATCTACG AGCCCATCGC
GCCTTTAAAC GTATTAATGA TGCGCATCTT TATGAGTTTG CCAAACACAG TCTGGTACAA
AATAAGCCAG GGCACTATCG TCTAATGTTT GCACCTGAAC AGGAGTTAGC CAGCTATTTT
GATACTCCTT TTGTCACAGA CGCTTTACAA GATTTAAATG CTTTATCTCT TTGCTATACT
ATTATTGTCG GTAAACCCTC TTTATTTATT AGCGACGAGG TACGCAAGGT ATGGCAGCAG
CTGGTCCCTG CGGATCGTAT TATTGAGCTA TCAGACAACG GTCATTTGCT ACCCATGGAG
GCTCCTGAAC AGTGTGCATC CCTTATAATT CAAAGATTTA ACAAGGGTAT TGCCAGTACG
TTGTCATCAT AG
 
Protein sequence
MQTFDRTITL DGKKARYYDL SDLAHKTANL PLAPAHFYGG NGFTTGVYLP LLTKLSEQFT 
ITSLALRGYW HDLPTVKKLT REEDADILID FLEKTQDKPI VGIGHSQGAT ATAIAAAKRP
ELFSELYLIE PVTFTKSQTQ MMNAAPDEVK ITQEPFKSTR AKQADWESIN AYYDYLRAHR
AFKRINDAHL YEFAKHSLVQ NKPGHYRLMF APEQELASYF DTPFVTDALQ DLNALSLCYT
IIVGKPSLFI SDEVRKVWQQ LVPADRIIEL SDNGHLLPME APEQCASLII QRFNKGIAST
LSS