| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0995 |
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| Symbol | |
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| ID | 5205694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1181647 |
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| End bp | 1185963 |
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| Gene Length | 4317 bp |
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| Protein Length | 1438 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599214 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001279895 |
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| Protein GI | 148652802 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000102149 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTAAAG ACACGAATAG CACTGCCTCC TCTAATCCTC AAGAGCCCTC GTTAATGCAG
GCGCATCAAC ATAATGCGTC TGTGGTAGAG GATGGCTCAA ACGATAAGAT AAGCTCTAAA
TTGGCTGTTT TTGAATCGAT GAAGGAGCTG CCGGTACTGG CCAAAGACCG TCATTTTCTA
AGCCGCTTGC AGCGTGAATT ATCACGTCCG CCAAAAAACG CAGACCCTAA AGTATTGGCA
GACAAGCAAG CTAAGTTTGA GCAAATAAAG CAGCGCTCAC AGCACGTGGT ACAACAGCGT
ATTGACAGCA TTCCTCATAA TTTGCCGCAG CTGCTTAATG ATGAGCTGCC AGTCAGTAAG
CGCAGCACCG ATATTATTCA GGCCATCACC GACCATCAAG TGATTATTGT GGCCGGTGAG
ACCGGCTCAG GTAAGACCAC TCAGCTGCCG AAGCTTGCGA TGCTGGCAGG CCGAGGTATT
ACGGGTCAGA TTGGCCATAC TCAGCCCAGA CGACTGGCGG CGCGCAGTGT GGCCAACCGA
ATCGCTGAAG AGCTGGGTGA GCCACTTGGG GAAACGGTTA GCTTTAAGAT TCGGTTTAAT
GAGCAAGGCA GCGCCCAATC CGTGGTCAAA TTAATGACCG ATGGTATCTT GCTGGCCGAG
CTGGGCCATG ATCGCTTTTT AACCCGTTAT GACACAATTA TTATCGATGA GGCGCATGAA
CGCAGCCTAA ATATCGATTT TATTATGGGC TATTTAAAAC AGCTGCTGCC CAAGCGTCCA
GATTTGAAGG TGATTATTAC CTCAGCCACC TTGGATACCG GCCGTTTTAG TGAGTATTTT
GCTCAGTATG ACCCTGTTAA AAAGCGTATG GTGCCGGCGC CTGTTATTGA TGTCGAGGGC
CGAGGCTATC CAGTTGAAGT GCGCTATCGT CCGCTGACAG ATACCCCAGT GAGCAGCTCA
GATGACGACA GTTATGATGA CTTTGAGGAT AATCTGCCGC GTGCGGTGGT GGCGGCGGTA
GAGGAGTGCT TTGAAGATGC GATTGCTAAA GGGCATCCTG AGCATGCCGA TATTCTGATA
TTTGCCGCAA CCGAAGCAGA GATTCGTGAG ATGCAAGAGG TGCTGGTGCA ACATGGGCCG
CGCCATACTG AAGTGCTGCC ATTATTTGCG CGCCAGACTT ACGCTGAGCA GCAGCGTATC
TTTCAGCCCT CAGGTCGCGG CAGACGCATT GTTATTGCCA CCAACGTGGC AGAGACCGCG
CTGACTGTCC CAGGTATCCG CTATGTTATT GACTTAGGTT TTGCGCGTAT CTCACGGTAT
TCGTATCGCT CACGGGTACA AAGACTGCCT ATTGAGGCCA TCTCACAAGC GGCGGCCAAC
CAGCGTAAAG GGCGCTGTGG TCGTGTGGCG CCTGGGGTAT GTATCCGCCT ATATTCAGAA
GAAGACTTCG CCAGTCGCCC TGAGTTTACT GAGCCTGAGA TTCTGCGTAC CAACTTAGCA
TCGGTGATTT TACAGATGGC AAGCCTGCGT CTGGGCACAG TAGAGAGCTT TGATTTTATC
GAGCCACCTG ATAGCCGCTT GGTCAAAGAT GGCCGAAAGC TGCTCGATGA GCTCGGTGCA
CTGACGCCAA AAAATAGCGA CAGTAAAAAA CCTGTGGCTA AGCAAACACT CAATGATGTC
AAGCTGACCC GTATTGGTCA AAAAATGGCA CGCATGCCGA TTGACCCAAG GCTTGCCCGT
ATGCTGGTCG CTGGTAGTGA CTTTGATTGT ATGCTTGAGA TGCTCATCAT TGTGGCTGCA
CTTGCGGTGC AAGATCCCAG AGAGCGTCCA GCCGAGAAGC GGGCTCAGGC TGATCAAAAA
CATGCTATTT TTCGTCAAGA AGACTCTGAT TTTCTATTTT ATCTAAGCCT ATGGAACGCT
CTGTATGGCG GCGGTAGTAA TAAGCTAAGC AGCAGTCAGC GCAAATCCTT TGCCAAAAAG
CATTATCTAA GCTTCCCGCG TCTGCGTGAA TGGGAGAAGA CCTACCGCCA GCTTGAGCAA
ATGGTGACTG ACCTAAAGCT GCTCACAGAC TCTGGCACAG AGCATAAAGA CAAGCCCCAC
ACGCAAAATG ACGCTGCTAA GGGCCAGCGT CATGCCAATC AGGCAGTAAC AGTGGCCAAA
AGCGTGGCCA CGGACCTAAT TGTTGATAAT GCCAGTGATA ACAAGGTCAA TGAAGCGCAG
CGTGCGGTGA AATATGCCAA CCTGCATCGT GCGTTACTAA CTGGCTTACT GTCTGTTATT
GCGCATAAGA CAGATCAGCG TGGTGAGTAT CTGGCTGCAC GTCAACAAAA AGCCAAAATA
TTCCCAGCCA GTACCGTGTT TAAGCAAGTA CCTGCTTGGG TAATGGCGTT TGAAATAGTT
GAGACCTCAC AAGTATTTAT GCGCACCGTG GCAAAAATTG AGCCAGAATG GATTATCTCT
GCCGGGGGCA ATCTGCTTAA ATACCATTAC TTCGAGCCGC ATTGGTCGAA GAAAACTGGT
CGCGTGCGTG CTTATGCTCA GATCAGCTTA TTTGGTCTGA TTGTGGTCGC TAAGCAATTG
ACAAATTATG AACAGATTAA CCTAGAGGAG TCACGAGAAA TATTCATTCG CGATGGTCTT
GTGACTGGTA ATCTGGGCCG TCAAGCGCCT TTCTTACAGC ACAATATGGA CAAAATTGCA
GATGTTGAGC GTATAGAAGA AAAGCTGCGT CGCCGTGATT TGTTAGTGGA TGAAGAGGAC
TTATATCAAT TCTACGAGCG CAAAATCCCA GAACACATTG CCAGCCGTAA AGCCTTTGAA
GACTGGCGTG CTGACGTTGA AAAAGACGAC CCAAAATTCT TGTTCTTTAC CGATGAGGAT
GTGCTGAAAG AGACGGCACC GACCACAGGC GAGTTCCCAG AGGTTTGGCA ATTAGGTGAT
TTAAAGCTGC CTCTTAAATA CGTGTTCGAT CCGGCCTCTG AAGATGATGG GGTGACCATT
AGAGTACCGC TTGCTGCCTT ACCGCAGCTA GATGCCATTG AACTGTTATG GGGGGTACCA
GGCTGGCGTT ATGAGCTGGT GCTGCAATTG CTCAAATCCT TGCCCAAAGA GATTCGCCGC
AAGATTGTGC CCATTCCCAA TACCGCAGAC AGCTTATATG ACGAGCTTGA AAAAAACCAC
CAGCAAGGTT TATTAAACCA GCTGTGCCAG GCCTTGCAGC GGCGCGGTGT GCTTGGGGTA
AAACCAGAGG ACTTTAATCC AAGCGCTATC GACCGTTACC TGCAGCCACA AATCTGTGTG
GTTGATGACA AAAAGCGGGT CATTGAAAAA GGGCGTGATC TTAAAGCCTT GCAGCAACGT
CATGCCAGCA AGACCAGTCA AGCGTTAAGC AGCAGCCAAG ATACGCAAGG GGTACATACC
AGCTTCCCTG AGCACTTTAG ATTTAGCAAA AACCGTCATA GTGCCGGTAT TGTGATGAAA
GAGTTTTCTG CACTGGTGGC TGATGAGGCT GGCGAGGCGG TGACCATTCA TCAATTTACC
GATGTGACAG CAGCGCTAAA AGCGCATCGC AAAGGGGTAT TGACCCTTAT CCGCAGCAAA
CTCGGTGCCA AGCAAAAGCA GCTCACCAGT CAGATTGATA AGACCTTTAA GCTGGCCTTT
GCGCCTTTAG GCGATATGGA GAAATTAAAG ACCATCGTGG TAGACGCCAC GCTTGACGCC
ACCTTAGAAG CGTACGCACC AAGTTTTCAA GATCATGACG AAGCGCTGCC TGATAATGCT
GATAAGGTTG CTGAGAAATT GGCCAATCAG TTGCCGCTAG ATGACACAGA GTTTGAAAAA
ACATCTGAAA AGGTATTGGC CAATTTCTTA TTAGAAGGCC AAAAAGTGCT AAGACTGCTG
CGAGATGTCT ATGCGCGATG GCAGCGTATC CGCCGCAGCT TACTGATGCT TGATCGTGAC
GTGTTTGGTG AATCGATAGA TGATATCGAG GATCAGCTTG ATGATTTGCA TTTGTCAGAC
TTTGTGTATC GTATGGCGTA TGAGGATTGG CAGCAATATC CGCGTTATCT TGAAGCATTA
GAGATACGCA TTGAGCGCTT AGAGCATAAT CTTGATGGCG ATCTGGACGC GGTGTATGAG
CTTGATGTCC ATATGGAGCG TTTGGCGGGG CGTGCAGATG ACGAGAGCAT TAGTGACTAC
CGCTGGCTGG TTGAGGAGTT TCGTATTCAG CTGTTTGCGC AGCCGATGAA AACCCGTCAG
TCGGTGTCAC AAAAGCGGCT TAATAAAATG TGGGAACAGG TCAATGCTCG GCGGTAA
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| Protein sequence | MTKDTNSTAS SNPQEPSLMQ AHQHNASVVE DGSNDKISSK LAVFESMKEL PVLAKDRHFL
SRLQRELSRP PKNADPKVLA DKQAKFEQIK QRSQHVVQQR IDSIPHNLPQ LLNDELPVSK
RSTDIIQAIT DHQVIIVAGE TGSGKTTQLP KLAMLAGRGI TGQIGHTQPR RLAARSVANR
IAEELGEPLG ETVSFKIRFN EQGSAQSVVK LMTDGILLAE LGHDRFLTRY DTIIIDEAHE
RSLNIDFIMG YLKQLLPKRP DLKVIITSAT LDTGRFSEYF AQYDPVKKRM VPAPVIDVEG
RGYPVEVRYR PLTDTPVSSS DDDSYDDFED NLPRAVVAAV EECFEDAIAK GHPEHADILI
FAATEAEIRE MQEVLVQHGP RHTEVLPLFA RQTYAEQQRI FQPSGRGRRI VIATNVAETA
LTVPGIRYVI DLGFARISRY SYRSRVQRLP IEAISQAAAN QRKGRCGRVA PGVCIRLYSE
EDFASRPEFT EPEILRTNLA SVILQMASLR LGTVESFDFI EPPDSRLVKD GRKLLDELGA
LTPKNSDSKK PVAKQTLNDV KLTRIGQKMA RMPIDPRLAR MLVAGSDFDC MLEMLIIVAA
LAVQDPRERP AEKRAQADQK HAIFRQEDSD FLFYLSLWNA LYGGGSNKLS SSQRKSFAKK
HYLSFPRLRE WEKTYRQLEQ MVTDLKLLTD SGTEHKDKPH TQNDAAKGQR HANQAVTVAK
SVATDLIVDN ASDNKVNEAQ RAVKYANLHR ALLTGLLSVI AHKTDQRGEY LAARQQKAKI
FPASTVFKQV PAWVMAFEIV ETSQVFMRTV AKIEPEWIIS AGGNLLKYHY FEPHWSKKTG
RVRAYAQISL FGLIVVAKQL TNYEQINLEE SREIFIRDGL VTGNLGRQAP FLQHNMDKIA
DVERIEEKLR RRDLLVDEED LYQFYERKIP EHIASRKAFE DWRADVEKDD PKFLFFTDED
VLKETAPTTG EFPEVWQLGD LKLPLKYVFD PASEDDGVTI RVPLAALPQL DAIELLWGVP
GWRYELVLQL LKSLPKEIRR KIVPIPNTAD SLYDELEKNH QQGLLNQLCQ ALQRRGVLGV
KPEDFNPSAI DRYLQPQICV VDDKKRVIEK GRDLKALQQR HASKTSQALS SSQDTQGVHT
SFPEHFRFSK NRHSAGIVMK EFSALVADEA GEAVTIHQFT DVTAALKAHR KGVLTLIRSK
LGAKQKQLTS QIDKTFKLAF APLGDMEKLK TIVVDATLDA TLEAYAPSFQ DHDEALPDNA
DKVAEKLANQ LPLDDTEFEK TSEKVLANFL LEGQKVLRLL RDVYARWQRI RRSLLMLDRD
VFGESIDDIE DQLDDLHLSD FVYRMAYEDW QQYPRYLEAL EIRIERLEHN LDGDLDAVYE
LDVHMERLAG RADDESISDY RWLVEEFRIQ LFAQPMKTRQ SVSQKRLNKM WEQVNARR
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