| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0991 |
|---|
| Symbol | aspS |
|---|
| ID | 5205069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1176400 |
|---|
| End bp | 1178205 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640599210 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_001279891 |
|---|
| Protein GI | 148652798 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000125703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000115783 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGTA CCGAGTATTG TGGGGCCGTA ACCGAAGCGT TACTAGAGCA AACCATCACT
ATAACAGGCT GGATTCATCG TCGCCGTGAC CATGGTGGGG TTATCTTTTT AGATATGCGT
GATCGCGCGG GTATCTTGCA GGTTGTCGTT GACCCCGATA CGCCAGAAGC TTTTGTAACC
GCTGATGCTG CACGTTCTGA GTATGTATTA AAGATTACAG GTCGTGTGCG CAAGCGCTAT
GAAGGTACCG AAAACGCGAA TATGACCAGT GGGAATGTTG AGCTGTTGGC CAAAGAAATT
GTCGTATTGG CCAAATCTGA AACACCGCCA TTTCCATTAA ATGACGAGAA TATCTCTGTA
TCAGAAGATT TGCGCCTAAA ATACCGCTAT TTAGACATGC GTCGTCCAGA GATGCAAGAG
CGTATGGTAT TTCGCGCCAA AGCCACCTCT ACCATCCGTC GTTATTTAGA TGACCAAGGT
TTCTTAGACG TTGAAACCCC AATTTTGACT CGTGCCACAC CAGAGGGTGC ACGTGACTAT
CTTGTGCCAT CACGTACCCG TCCAGGTAAC TTCTTTGCTT TGCCTCAGTC GCCACAGCTG
TTCAAACAGT TATTAATGGT GGCAGGCTTT GATCGTTATT ATCAAATCGC CAAGTGTTTC
CGTGATGAAG ACTTACGTGC CGACCGTCAG CCAGAATTCA CTCAGGTGGA TATCGAGACG
TCTTTCTTGT CTGAAGAAGA CATCATGGAC ATCAACGAAG GCTTGATCCA AAACCTATTT
AAGACCATGC TAGATGTGGA CTTAGGTAAG TTCCCACGTA TGACCTACGC TGAAGCCATG
CGTGACTATG CCTCTGATAA GCCTGATTTA CGTATCCCAT TAAAACTAAT CGACGTCGCA
GACTTGATGC AGTCGGTTGA TTTTAAAGTG TTTGCAGGCC CTGCTAACGA TCCTAAAGGT
CGTGTGGCCG CCTTACGTGT GCCAAATGGT GGCTCACTAA CTCGTAAGCA AATCGATGAA
TACACCAAAT ACGTCGGCAT CTATGGTGCG CGTGGTCTGG CATATATCAA AGTTAACGAT
GCCAGCAACA TCAACAATGG CGTCGACAAA GAGTCTGGCC TACAATCGCC TATCATCAAA
AACATGAGCG ATGAGGTGTT GGTAAGCTTA ATTGAGCGTA CAGGCGCACA AGATGGCGAC
ATCATTTTCT TTGGTGCAGA TAAAGCCAAG ATTGTGAATG ATGCTATGGG TGCGCTACGT
GTCAAAATCG GTCTAGATAT GAACATGGAA ACTTGTGAGT GGGCTCCGCT ATGGGTCGTC
GACTTCCCAA TGTTCGAGGA GACCGATGAT GGTAAGTGGA CCTCAATGCA CCACCCCTTC
ACCATGCCAA AAGGCTCAGT TGAAGAGCTA AAAAATAGCC CAGAAACAGC CCTATCTATC
GCCTATGATA TGGTACTAAA CGGTACTGAG ATTGGCGGTG GTAGCTTACG TATTAACACA
GTTGAGATGC AGCGTGCAGT ATTTGATGCC TTAGGTATCT CAGAAGAAGA AGCCAACGAG
AAGTTTAGCT TCTTATTAGA CGCTTTAAAA TTCGGTGCGC CTCCGCATGG CGGCTTAGCC
TTCGGTTTGG ACCGTCTGAT TATGCTTATG GTGGGCGCAA GCTCTATTCG TGACGTGATT
GCGTTCCCGA AAACCAAAAC TGCAGACTGC CCATTAACTC AGGCCCCTGC AGAAGTCGAC
AGCCGTCAGC TGCGTGAGCT AGGCATTCGT GTGCGCGAAA AAGCGCAAGC TGAAAACAAA
GAGTAA
|
|---|
| Protein sequence | MMRTEYCGAV TEALLEQTIT ITGWIHRRRD HGGVIFLDMR DRAGILQVVV DPDTPEAFVT
ADAARSEYVL KITGRVRKRY EGTENANMTS GNVELLAKEI VVLAKSETPP FPLNDENISV
SEDLRLKYRY LDMRRPEMQE RMVFRAKATS TIRRYLDDQG FLDVETPILT RATPEGARDY
LVPSRTRPGN FFALPQSPQL FKQLLMVAGF DRYYQIAKCF RDEDLRADRQ PEFTQVDIET
SFLSEEDIMD INEGLIQNLF KTMLDVDLGK FPRMTYAEAM RDYASDKPDL RIPLKLIDVA
DLMQSVDFKV FAGPANDPKG RVAALRVPNG GSLTRKQIDE YTKYVGIYGA RGLAYIKVND
ASNINNGVDK ESGLQSPIIK NMSDEVLVSL IERTGAQDGD IIFFGADKAK IVNDAMGALR
VKIGLDMNME TCEWAPLWVV DFPMFEETDD GKWTSMHHPF TMPKGSVEEL KNSPETALSI
AYDMVLNGTE IGGGSLRINT VEMQRAVFDA LGISEEEANE KFSFLLDALK FGAPPHGGLA
FGLDRLIMLM VGASSIRDVI AFPKTKTADC PLTQAPAEVD SRQLRELGIR VREKAQAENK
E
|
|---|
| |