| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0987 |
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| Symbol | |
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| ID | 5206194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1172579 |
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| End bp | 1173343 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640599206 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001279887 |
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| Protein GI | 148652794 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.272877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000121289 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTAT TAACTTACTT AATCAACTTA GATGGCAGTG ACAAACGACT CGAGCGCTCT
ACCGAGCAGC TACAGCAGCA GAACTGGGAC TTTGAAAGAA TATCGGCGTA TGATGGGCGT
GGTAAAGCAT TATCTGAGTT TGTCGATTAT GATGACGAAC AAACGCGCAG TAACTTAGGC
CGCAGCCTTT TAAACTCAGA AATCGGCTGT TATCTGAGTC ACTATCAGTG CGCCCAGAAG
TTTCTTGAGA CCGATGCGGA TATGCTGATA GTTTTAGAAG ATGATATGAA GATGTCCAGT
GCATTTGCGC CGGTAGTCAA AGAGGCCGTA TCGTATTTAT ATACGCATCC AGAGCTTGAC
TGGTATTTGG TCAATATTGC TGCCAAAAAA AAGAAGCTGG CCAAAGATAT CACAACCATC
AATGAACATA CGCTTTGGCA CGCCTATTAT TTTCCTATTA GGGGTCTTGG ACTGATTTGG
TCACGTAAAG GCGCCGAAGA ATTTGTTAAG CATGGCAAGC CCATTACGAT GCCAGTCGAT
ATTTTCTTTC AAAGATGGCT CAGTCAAAAT GGCAAAGGTC TAGGCGTTTG GCCCGCCGTG
ATTAGCCCCA TGGGGATCGA TAGTGATATT TTAGGCACTC AGTCCAGTCA AAATATTCAG
CGTAAAGATA AAGAAGGCCG AGATGGCAGC TATAATCTCA AAAAACAAAA AAGAATGCTA
CAAGACAAAG CGGCGGCTGT TAAGCATCTT TATTTGAATA AATAG
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| Protein sequence | MKVLTYLINL DGSDKRLERS TEQLQQQNWD FERISAYDGR GKALSEFVDY DDEQTRSNLG
RSLLNSEIGC YLSHYQCAQK FLETDADMLI VLEDDMKMSS AFAPVVKEAV SYLYTHPELD
WYLVNIAAKK KKLAKDITTI NEHTLWHAYY FPIRGLGLIW SRKGAEEFVK HGKPITMPVD
IFFQRWLSQN GKGLGVWPAV ISPMGIDSDI LGTQSSQNIQ RKDKEGRDGS YNLKKQKRML
QDKAAAVKHL YLNK
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